Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01603 ATGGACAAATACGAGCTCGTCAAGGATATAGGATCTGGGAATTTCGGTGTGGCCAGGCTCATGCGTCACAAAGACACCAAGGAGCTTGTTGCCATGAAATACATTGAACGGGGTCACAAGattgatgagaatgttgcgagggaaatcataaaccatagaagtcttcggcaccctaatattattcggttcaaggagGtggttctgactccaacacatctgggtattgttatggagtatgcagctggtggagagctctttgagaggatttgcagtgctggaagattcagcgaagatgaggctcgatatttcttccagcagctcatctcaggagttagctactgtcattccatgCAAATCTGCCATCGAGACTTGAAGCTGGAGAACACCTTATTGGATGGCAGCCCTGCCCCACGGCTCAAAATTTGTGATTTTGGTTATTCTAAGTCATCTCTGCTTCATTCTAGGCCTAAGTCAACGGTGGGAACCCCAGCCTACATTGCACCAGAGGTTCTTTCACGTAGAGAATATGATGGAAAGTTAGCAGATGTATGGTCCTGTGGAGTGACTCTTTATGTAATGCTGGTGGGAGCATACCCATTTGAAGACCAAGACGATCCCAAAAATTTCAGGAAAACCATCAATCGAATTATGGCTGTTCAATACAAGATCCCAGACTATGTTCACATATCTCAAGACTGTAGACATCTTCTATCTCGCATTTTTGTGGCAAATCCAGCTAGGAGAATCACCATTAAGGAAATCAAGTCCCATCCATGGTTTTTAAAGAACTTGCCCAGGGAATTAACAGAAGTAGCTCAAGCTGCCTACTACAGAAAAGAAAACCCAACCTTTTCTCTTCAGAGTATAGAGGGCATCATGAATATTGTTGAGGAGGCCAAGACTCCACCTCCAGCATCCAGGTCAATTGGAGGATTTGGCTGGGGAGGGGaagaagaagaggatgaaacaaaagaagaggaggatgaaacaaaagaagaagCAGTGACCGAGGCTGAAGAAGATGAGTACGAAAAGAGAGTCAAGGAAGCACAGGCAAGTGGGGAATTTCATGTCAGTTAA 1080 0.3343 MDKYELVKDIGSGNFGVARLMRHKDTKELVAMKYIERGHKIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLGIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNFRKTINRIMAVQYKIPDYVHISQDCRHLLSRIFVANPARRITIKEIKSHPWFLKNLPRELTEVAQAAYYRKENPTFSLQSIEGIMNIVEEAKTPPPASRSIGGFGWGGEEEEDETKEEEDETKEEAVTEAEEDEYEKRVKEAQASGEFHVS 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01603 359 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01603 359 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01603 359 SUPERFAMILY Protein kinase-like (PK-like) 2 291 IPR011009 -
Gma12g01603 359 MobiDBLite consensus disorder prediction 315 339 - -
Gma12g01603 359 Coils Coil 333 353 - -
Gma12g01603 359 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Gma12g01603 359 MobiDBLite consensus disorder prediction 301 359 - -
Gma12g01603 359 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Gma12g01603 359 PANTHER SERINE/THREONINE KINASE 2 353 - -
Gma12g01603 359 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Gma12g01603 359 CDD STKc_SnRK2 3 259 - -
Gma12g01603 359 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Gma12g01603 359 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2A-RELATED 2 353 - -
Gma12g01603 359 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01603 Gma-Chr12 35896213 35898712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01603 3 263 CBL-interacting serine-threonine protein kinases AT4G24400 43.704 3.10e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Gma12g01603 Pkinase 4.2e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01603 K14498 - gmx:100809324 690.263