Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01594 ATGGCTGTACATACAGAATTCCCTCTTATTACTTACTCACAAGAGATTGTAGATGGACAGCCTATTTTTGTCTCTTCAAACTGTCTTCCTATCAAGGCTTTGAAATTTGAACCTGCAGGTCATTCTTTCCATTCTGCTGCACTTAAACTTCTTGGTGTTCAGGAAGATAACAATGATGCTGATGATAAAAAAGTGGTTGATGATAAGGAACAAACATATCTCCCATCTGATTCTTATAGCAGCAAGAGCAAAAAGAAATCTGGCACTGGAGACAAGCAACAGGATCACTATGCATTATTGGGTCTGGGTCATCTAAGGTATCTTGCTACGGAGGATCAAATTCGTAAAAGCTATCGTGAAACTGCCTTGAGGTTTCATCCTGACAAACAGGCTGCTCTTCTTCTTGCCGAGGAAACTGAAGCTGCAAAACAAACAAAAAAGGATGAAATAGAAAGTCACTTTAAGGCAATCCAAGAAGCATATGAAGTGTTGATTGATCCTGTGAAGAGAAGAATCTATGATTCCACAGATGAGTTTGATGATGAGATTCCCACTGATTGTGCTCCACAAGACTTCTTCAAGGTGTTTGGTCCTGCTTTTATGAGGAATGGGCGGTGGTCAGTTAATCAACCAATTCCATCACTAGGTGATGATAATACTCCGTTAAAAGAAGTTGATAATTTCTACAATTTTTGGTACTCCTTTAAAAGTTGGAGGGAGTTTCCTCATGCTGATGAGTTTGATCTTGAGCAAGCTGAATCTCGAGACCACAAGAGATGGATGGAAAGGCAGAATGCAAAATTGACAGAAAAAGCTAGGAAGGAAGACTATGCACGGATACGCACTCTTGTTGATAATGCTTATAAGAGAGATCCCAGAATATTGAGAAGAAAGGAAGAAGAAAAAGCTGAGAAACAAAGGAAAAAGGAGGCTAAGTTCCTAGCAAAGAAGGTGCAGGAAGAAGAAGCAGCCAGAATTGCAGAAGAGGAGAGGCAACGAAAAGAGGAGGAAGAGAGACAAGCTGCAAAAGCTGCTTTACAACAGAAGAAGGTGAAAGAGAAAGAGAAAAAACTCTTGCGGAAGGAGCGAGCACGTCTTCGGACTCTTTCAGGACCTATTTTATCACAGCATTTACTTGATATTTCTGATGATGATGTAGAAAGGCTTTGCATGTCACTTGATATTGAGCAGCTGAGGAGTCTCTGTGAGAACATGGAAGGCAGACAGATGTTATTAGAACAAGCAAAAGTTTTGAGATATGCACTGAGTTCTAAGAAAGAAGAGGTGGTTGATGAGAAAACTAATCAACAAAATGCCAATGGTTCCATCAAGGCTAATGGGATTTCTTCCCTAAGCAACATTGAGAAGAAGGAGAAACCATGGAGTAAAGAAGAGATTGATCTATTGAGGAAAGGAATGCAGAAATATCCCAAAGGAACCTCGCGGAGATGGGAGGTTATTTCAGAATACATTGGTACTGGAAGATCTGTTGAAGAAATCATGAAGGCAACTAAAACTGTACTCCTTCAGAAACCTGATTCGTCAAAAGCTTTTGACACATTTCTTGAGAAAAGGAAACCTGGTGCACAATCAATTGAGTCTCCATTGACAACCAGAGAAGAATTAGGAGTGCCAGCTCCTGCCTCAACAAATAACGTAGAAGACTCTCAGAATAAAAGTACAGATAATCAGAACTCCCCTGCTAATGGAGTTTCTTCCAGTTCAGAACAGGATGTGTGGTCTGCAGTGCAGGAACGAGCGCTGGTTCAAGCTTTAAAAGTCTTTCCAAAGGAAACAAGCCAGAGATGGGAGCGTGTTGCAACTGCTGTACCTGGGAAGACTGTGAATCAGTGTAAGAAAAAATTTGCATTGATGAAGGAGAGTTTCAGGAACAAGAAAAGTGCAGTCTAA 1911 0.4066 MAVHTEFPLITYSQEIVDGQPIFVSSNCLPIKALKFEPAGHSFHSAALKLLGVQEDNNDADDKKVVDDKEQTYLPSDSYSSKSKKKSGTGDKQQDHYALLGLGHLRYLATEDQIRKSYRETALRFHPDKQAALLLAEETEAAKQTKKDEIESHFKAIQEAYEVLIDPVKRRIYDSTDEFDDEIPTDCAPQDFFKVFGPAFMRNGRWSVNQPIPSLGDDNTPLKEVDNFYNFWYSFKSWREFPHADEFDLEQAESRDHKRWMERQNAKLTEKARKEDYARIRTLVDNAYKRDPRILRRKEEEKAEKQRKKEAKFLAKKVQEEEAARIAEEERQRKEEEERQAAKAALQQKKVKEKEKKLLRKERARLRTLSGPILSQHLLDISDDDVERLCMSLDIEQLRSLCENMEGRQMLLEQAKVLRYALSSKKEEVVDEKTNQQNANGSIKANGISSLSNIEKKEKPWSKEEIDLLRKGMQKYPKGTSRRWEVISEYIGTGRSVEEIMKATKTVLLQKPDSSKAFDTFLEKRKPGAQSIESPLTTREELGVPAPASTNNVEDSQNKSTDNQNSPANGVSSSSEQDVWSAVQERALVQALKVFPKETSQRWERVATAVPGKTVNQCKKKFALMKESFRNKKSAV 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01594 636 CDD SANT 580 626 IPR001005 -
Gma12g01594 636 ProSiteProfiles dnaJ domain profile. 95 177 IPR001623 -
Gma12g01594 636 PRINTS DnaJ domain signature 48 66 IPR001623 -
Gma12g01594 636 PRINTS DnaJ domain signature 118 133 IPR001623 -
Gma12g01594 636 PRINTS DnaJ domain signature 149 169 IPR001623 -
Gma12g01594 636 MobiDBLite consensus disorder prediction 329 349 - -
Gma12g01594 636 CDD SANT 460 502 IPR001005 -
Gma12g01594 636 PANTHER DNAJ DOMAIN, MYB-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 1 634 - -
Gma12g01594 636 MobiDBLite consensus disorder prediction 59 92 - -
Gma12g01594 636 ProSiteProfiles Myb-like domain profile. 572 622 IPR001005 -
Gma12g01594 636 Pfam Myb-like DNA-binding domain 459 500 IPR001005 -
Gma12g01594 636 SUPERFAMILY Homeodomain-like 578 633 IPR009057 -
Gma12g01594 636 SMART dnaj_3 94 169 IPR001623 -
Gma12g01594 636 Coils Coil 317 369 - -
Gma12g01594 636 MobiDBLite consensus disorder prediction 522 577 - -
Gma12g01594 636 Gene3D DnaJ domain 78 187 IPR036869 -
Gma12g01594 636 ProSiteProfiles SANT domain profile. 575 630 IPR017884 -
Gma12g01594 636 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 1 634 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Gma12g01594 636 Coils Coil 395 415 - -
Gma12g01594 636 ProSiteProfiles Myb-like domain profile. 453 508 IPR001005 -
Gma12g01594 636 Pfam DnaJ domain 95 174 IPR001623 -
Gma12g01594 636 ProSitePatterns Nt-dnaJ domain signature. 154 173 IPR018253 -
Gma12g01594 636 SMART sant 457 510 IPR001005 -
Gma12g01594 636 SMART sant 576 628 IPR001005 -
Gma12g01594 636 Gene3D - 453 511 - -
Gma12g01594 636 Gene3D - 571 636 - -
Gma12g01594 636 MobiDBLite consensus disorder prediction 549 577 - -
Gma12g01594 636 CDD DnaJ 95 166 IPR001623 -
Gma12g01594 636 SUPERFAMILY Homeodomain-like 453 502 IPR009057 -
Gma12g01594 636 SUPERFAMILY Chaperone J-domain 93 201 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01594 Gma-Chr12 35829689 35833916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01594 96 295 C2H2 Transcription Factor Family AT1G74250 28.452 7.88e-18 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gma12g01594 DnaJ 4.2e-17 CL0392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01594 K09522 - gmx:100806665 1114.37