Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01591 ATGGAACTATCAGATTTGCAAAACAAGAAGCAGAGCAGCAGCAGCAGCAGCACAGGTGCTACTCATCAACAACAACAACAACAACAACAATCCTCTTCTACCCATCTTGTTGTGCCTTCCCCTTCCAATTCTTCCGCATCCCTCATCGACGCCTCCTTAGCCATCGCCACCAGATCTGATGATTCGACCAAGAAGACCCAACAACCCTCCACCAACACCAAGCGATCCACCAAGGACAGGcacaccaaagtcgacggccgcggccgcagaattcgaatgcccgccacctgcgccgctagggttttccagttgacaagagaattgggccacaagtccgacggcgaaactATCGAATGGCTCCTCCAGCAGGCCGAGCCCGCCATCATCGCCGCCACCGGAACCGGAACCATCCCCGCCAATTTCTCCACCCTCAACGTCTCCTTACGCAGCAGCGGCTCCACGCTCTCGGCGCCGCCCTCCAAATCAGCCCCGCACACCTTTCATGGCGCCCTCGCACTCGCTCACCACCCTTACGACGAAGCCTTTCAACACCCCGCTCTTCTTGGCTTCCACCCTCACCATCACCAGCAGCAGCTTCTCTCCGCCGATCAAATCGCAGAAGCGCTTCCCAGCGCTGGCGGCGGTGACTCCGGCGGCAACTACCTTAGAAAGCGCTACCGAGAAGATCTCTTCAAAGACGATAACATCAACAATACCCAATCTCAGAACGATAGCggtgatgctgatggtgatgctgatggtgatgGGTCTTCGCCTAAGTTACCCAAGGAAGCTGGGTCTGGGCTTCTTCGGCCCACCAATTTGCTTCCCGCAACAGCGATGTGGGCTAGTGGACCCCCTGGAAGCACAATTTGGATGCTTCCCGTAACCGCCGCGGCGGCTTCTTCTTCTTCTTCATCTTCTTCTGCTTCGTCTGCGGCAAGTTCGGAGAGTCAGATGTGGGCGTTTCCTCAGAGTGTGAGTGGTTTCATGCCGAGGTTCAACCTTCCGGTTCCGGGTGCGCTTGAATTCCAAGGCGCACGTGCGGGTTCTCTTCAATTGGGCCCCTCCATGTTAATGCCGCCGCCGCCGCTGCCGCCGCAACAGCAACAGCAGCCCTCTCAGCATCTGGGCCTTGCCATaccatcatcatcatcatcatcatcatcatcatcatcaacatcaatctcaacctag 1197 0.4779 MELSDLQNKKQSSSSSSTGATHQQQQQQQQSSSTHLVVPSPSNSSASLIDASLAIATRSDDSTKKTQQPSTNTKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKSAPHTFHGALALAHHPYDEAFQHPALLGFHPHHHQQQLLSADQIAEALPSAGGGDSGGNYLRKRYREDLFKDDNINNTQSQNDSGDADGDADGDGSSPKLPKEAGSGLLRPTNLLPATAMWASGPPGSTIWMLPVTAAAASSSSSSSSASSAASSESQMWAFPQSVSGFMPRFNLPVPGALEFQGARAGSLQLGPSMLMPPPPLPPQQQQQPSQHLGLAIPSSSSSSSSSSSTSIST 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01591 398 MobiDBLite consensus disorder prediction 74 90 - -
Gma12g01591 398 MobiDBLite consensus disorder prediction 1 73 - -
Gma12g01591 398 MobiDBLite consensus disorder prediction 1 90 - -
Gma12g01591 398 Pfam TCP family transcription factor 76 188 IPR017887 -
Gma12g01591 398 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 15 384 IPR005333 GO:0003700
Gma12g01591 398 MobiDBLite consensus disorder prediction 371 398 - -
Gma12g01591 398 ProSiteProfiles TCP domain profile. 77 131 IPR017887 -
Gma12g01591 398 MobiDBLite consensus disorder prediction 353 398 - -
Gma12g01591 398 PANTHER TRANSCRIPTION FACTOR TCP8 15 384 - -
Gma12g01591 398 MobiDBLite consensus disorder prediction 232 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01591 Gma-Chr12 35751748 35753015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01591 74 360 TCP Transcription Factor Family AT1G35560 47.826 1.25e-59 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma12g01591 TCP 1.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01591 - - gmx:100814151 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01591 12 35751748 35753015 Gma12g01591 12 35751748 35753015 ECH