Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01574 ATGGGGGATGAGTCGCCCAGAAATAAAGTGAAGTTCCTCTGCAGCTACGGCGGGAAGGTCCTTCCACGACCCTCCGATGGCCTCCTCAGGTATGTCGGCGGCGAGACTCGTGTGGTTTCTGTGCCTCGTGACATCACATTTCCCGAGCTAATGAAGAAGGTGAGTAGCATGGTGGAGGGAGGCGGAGAGATGGTCCTAAAATACCAACTGGTTCCGGAAGATCTGGACGCATTGGTGTCGGTGAGAACAGAGGAAGACGTGAAGCACATGATGGAGGAGCACGATCGGCACCACACTGGAGGCTTGCTCCGTGCGTTCTTGTTCCCCCCTTGCAAGCACATAGGTCTGATGGCGTGCGAAACGTATCTGTTGGAGCAGCGATACATAGACGCCATTAATGGGATCATCCGAACAAGTTCCAGGAAGGGCTCTGCCTGTTCTTCCCCAAAATCAAACTCCCCCGATGCCACGGATCAGCACTCTCCTCGCTTTTCGATTTCCAGAGTGCAAAGCTCTCCGAACCTCAGTGGCCTCGatcatcatcatcaacatcatcatcatcaaAACCCTAATTTTCATTTGTCCAAACCGCCGCAAGATCCTCAAATGGGAATGAGGCTTGGTGGAGGAAGGGCTCCCACTCCCGCTTTTAACCATCATTACTCCAGGCAACCACCCTACAGAGCTTATGCCTACTATGATGACTCTGCAGCAGCCTCCTATGCCCATGATAATAGAATTCATACTGTGTCCAGGAGTCCTAGAACAAAATCTATTTGGGAATGA 786 0.5038 MGDESPRNKVKFLCSYGGKVLPRPSDGLLRYVGGETRVVSVPRDITFPELMKKVSSMVEGGGEMVLKYQLVPEDLDALVSVRTEEDVKHMMEEHDRHHTGGLLRAFLFPPCKHIGLMACETYLLEQRYIDAINGIIRTSSRKGSACSSPKSNSPDATDQHSPRFSISRVQSSPNLSGLDHHHQHHHHQNPNFHLSKPPQDPQMGMRLGGGRAPTPAFNHHYSRQPPYRAYAYYDDSAAASYAHDNRIHTVSRSPRTKSIWE 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01574 261 MobiDBLite consensus disorder prediction 140 221 - -
Gma12g01574 261 PANTHER OS05G0427100 PROTEIN-RELATED 4 213 - -
Gma12g01574 261 SUPERFAMILY CAD & PB1 domains 25 111 - -
Gma12g01574 261 MobiDBLite consensus disorder prediction 140 177 - -
Gma12g01574 261 Pfam PB1 domain 29 109 IPR000270 GO:0005515
Gma12g01574 261 CDD PB1_UP2 13 108 - -
Gma12g01574 261 PANTHER OS05G0427100 PROTEIN 4 213 - -
Gma12g01574 261 SMART PB1_new 24 110 IPR000270 GO:0005515
Gma12g01574 261 Gene3D - 30 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01574 Gma-Chr12 35483438 35484296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01574 3 152 MAP Kinase Kinase Kinase AT3G46920 42.857 2.00e-34 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01574 - - gmx:100799918 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01574 12 35483438 35484296 Gma12g01574 12 35483438 35484296 ECH