Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01565 ATGGGTTGTATATGCTCCAAAGGAAAATCTGCAGACCAATATGTTGCTGAAAACCATGCCAAAGATAGATCCTCCAACACCAAGCATTTGAGATTGGGGGGAAGAGAACTAACAGAGAATGATGCTACGGCTCACCTCATATCCAATGCAAATGCAATTGGACATGGAAATGGAACAGAAGAAGCCTCCACCTCCTCGGATGAACATCATCAAGGGGACAAGAATGTCAATGCCAATGCAACCGAACAATCACCACAACCTAAGattggccaaggaacttacagcagtgtttatagagctcgtgatctcgaaacaaataaaattgttgcactcaagaaggttcgatttgctaatatggatccagaaagtgtccgttttatgtcaagggaaatcattgtgctgcggaggcttgatcatccaaatgtcatgaagcttgaaggcatgattacttcaaggttttctggtagcttgtaccttatttttgaatatatggaccatgatcttgcaggccttgcagcaatacccaacatcaagtttactgaagcacagatcaagtgttacatgcaacagcttcttcgtggtcttgagcattgtcacagtcgtggtgttatgcaccgtgacatcaagggctcaaatcttctgcttgacagtaatggcaatctgaagattggtgattttgggcttgcagctttgtttcagccatctcatgggcagcctttaactagtcgtgtcgtaaccttgtggtaccgaccacctgaacttttgcttggagctacagattatggagttactgtggatttgtggagtgctggatgtattctggcagagttgtttgttgggaagcctataatgcctggacgaacagaggtaGTGGAGCAACTACATAAAATCTTCAAACTTTGTGGATCTCCATCTGAAGAATACTGGAAGAAGTCAAAGCCACCACATGCAACAGTTTTTAAACCTCAACAACCTTACAAATGTGTTATTTCTCAGACATTCAAGGATATTCCATCATCTGCACTGAGCCTATTGGAGGTCCTTCTTTCTGTAGAACCGAAAGATCGAGGAACTGCTTCTTTAGCCCTTCAGCATGAGTTCTTCACAGCAATGCCACTTCCTTGTGATCCATCAACGTTACCAAAGTACCCACCAAGTAAGGAGTTTGATGCCAAACTTCGCGAAGAGGAAACTAGAAGCAGACAAAGAGCAGTAAATAAAGGATATGAACATGAATCAGTTGGGAGAAATTTTAGAGAGTCCAAAGCTGTGCCAATACCTGATGCTAATGCTGAGTTTCAGGCAACTGTGGGGAGACAAGGACAGTGTAATTCTAAGTGCATTACTAAGAAGTACAATCCTGAAGAGGATGGTGATTACGGCTTCCACCGCGAACCTGCAAAGTCAAGAGCACTCGATGTATTATCTCATTCTGGCCAGTCAGTGCATCCAAGTGTATATGGATCCTCACGCAATATGAATCTGAAAGAGGAAGATCTCACTAGCCCAGATCATGGCTTTAGATCAAGAAAGTCTGAGTTGAGAAAACAAAAATCCTATTGGCAAGGTAGCACTGCAAAATTGTCAAGATTTTCTAATTCAGTTGCAGTTCAAGGTGATCCACTGCTTGATATGAGTGGTGACTCTAGTGCGAATTCGCAGTGGCCAGAAGATCAGTTTGGCATGAGATGTAGCCATCAGGCTGATGGTGATTCCAAACAATTGTTGGATGGACTCAAATCTTCACAGAAGAATGACTTTCATCCTATTGGGAAGGATCGTGCTAAGGGCTATGCTAACAAAAATGCCCGCATGCACCATTCTGGACCTTTGCTGGCTCCAGAGGATAATCTTGAAGAAATGCTTAAGGAACATGAAAGGCAAATCCAACAGGCTGTCCGCAAAGCTCGTTTAGGTAAGGACAAGACAAAAAAGGCTGACAGTGAGAGTGGCCTAACTGAATCACTATTTCACCATGTGAGAAATCAATAG 1992 0.2987 MGCICSKGKSADQYVAENHAKDRSSNTKHLRLGGRELTENDATAHLISNANAIGHGNGTEEASTSSDEHHQGDKNVNANATEQSPQPKIGQGTYSSVYRARDLETNKIVALKKVRFANMDPESVRFMSREIIVLRRLDHPNVMKLEGMITSRFSGSLYLIFEYMDHDLAGLAAIPNIKFTEAQIKCYMQQLLRGLEHCHSRGVMHRDIKGSNLLLDSNGNLKIGDFGLAALFQPSHGQPLTSRVVTLWYRPPELLLGATDYGVTVDLWSAGCILAELFVGKPIMPGRTEVVEQLHKIFKLCGSPSEEYWKKSKPPHATVFKPQQPYKCVISQTFKDIPSSALSLLEVLLSVEPKDRGTASLALQHEFFTAMPLPCDPSTLPKYPPSKEFDAKLREEETRSRQRAVNKGYEHESVGRNFRESKAVPIPDANAEFQATVGRQGQCNSKCITKKYNPEEDGDYGFHREPAKSRALDVLSHSGQSVHPSVYGSSRNMNLKEEDLTSPDHGFRSRKSELRKQKSYWQGSTAKLSRFSNSVAVQGDPLLDMSGDSSANSQWPEDQFGMRCSHQADGDSKQLLDGLKSSQKNDFHPIGKDRAKGYANKNARMHHSGPLLAPEDNLEEMLKEHERQIQQAVRKARLGKDKTKKADSESGLTESLFHHVRNQ 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01565 663 MobiDBLite consensus disorder prediction 497 518 - -
Gma12g01565 663 Pfam Protein kinase domain 87 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01565 663 SUPERFAMILY Protein kinase-like (PK-like) 87 376 IPR011009 -
Gma12g01565 663 Coils Coil 615 642 - -
Gma12g01565 663 MobiDBLite consensus disorder prediction 623 663 - -
Gma12g01565 663 Gene3D Transferase(Phosphotransferase) domain 1 166 407 - -
Gma12g01565 663 MobiDBLite consensus disorder prediction 76 92 - -
Gma12g01565 663 Gene3D Phosphorylase Kinase; domain 1 74 165 - -
Gma12g01565 663 PANTHER CELL DIVISION PROTEIN KINASE 88 640 - -
Gma12g01565 663 MobiDBLite consensus disorder prediction 497 517 - -
Gma12g01565 663 PANTHER KINASE CDK9, PUTATIVE-RELATED 88 640 - -
Gma12g01565 663 ProSiteProfiles Protein kinase domain profile. 83 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01565 663 CDD STKc_CDK9_like 86 368 - -
Gma12g01565 663 SMART serkin_6 83 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01565 663 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Gma12g01565 663 MobiDBLite consensus disorder prediction 52 92 - -
Gma12g01565 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01565 Gma-Chr12 35357310 35361811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01565 88 407 Core Cell Cycle Gene Families AT5G10270 48.955 2.78e-105 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Gma12g01565 Pkinase 2.6e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01565 - - gmx:100805055 1297.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01565 12 35357310 35361811 Gma12g01565 12 35357310 35361811 ECH