Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01512 ATGTGTTGTATCTCTAATGAGGATTCTATGTTCCTTGTGTATAAGTATCTTGAAAACCACAACCTAGATAAATGGCTGCACAAGAAGATTAAGTCAAGTTCAGTAAGTAAAGTGGTCCTTGATTGGCCAAAGAGGTTGAAAATAGCCATTGGAATTGTTCAAGGTTTGAGCTATATGCACCTTGACTGTTCACCACCTGTGGTTCATAGAGATATAAAAACAAGCAACATCCTTTTGGATACTCAATTCAATGCAAAAGTTGCTGATTTTGGAGCTAAGATGTTAATCAAGCCAGGGGAACTTAACACCATGTCAGCTGTGATTGGCTCATTTGGCTATATTGCTCCAGATAGAGCAAGGAAGCCAAGAACAAAACATTGTTTCTTCAAATTGGATTGTGGCCAACTCAAGAAAGAACGAGTTGTTAGAGTGACGTTAAAAGCTGAAACTTCTAAATTTAAGCTATACACCGACTACATGAGGAGCTTCAGAGATAATATGAAAGATTTTCTTGAATCTGAGCTCACGATAGACATTGAAGTAGGGCTTGGTCCTGCAGGAGAACTTCGATATCCTTCTTGCACACAAAATCTGGGGTGGGTATTCCCGGGTATTAGAGAATTTCAATGCTATGACAAATATATTAAAGATGATTTCAAAGGGGCTGCAACAAGGGCTGGCCATCCTGAACGGGAGATGCCAGATAATGTTGGAGAATTGAATGATGCACCTGAATCTACAAAAAATTTCAAGTCAAGGGGAACTTATCCAACAAAGAAAGGGAAATTTTTTCTAACATGGTATTCCAACAAATTATTGATTCATGGTAATGAGGTCTTGGATAGAGCTAACAATGTATTTCTAGGTTGCAAAGTGAAGTTAGCAGCAAAAGTAAACTCTTAA 903 0.381 MCCISNEDSMFLVYKYLENHNLDKWLHKKIKSSSVSKVVLDWPKRLKIAIGIVQGLSYMHLDCSPPVVHRDIKTSNILLDTQFNAKVADFGAKMLIKPGELNTMSAVIGSFGYIAPDRARKPRTKHCFFKLDCGQLKKERVVRVTLKAETSKFKLYTDYMRSFRDNMKDFLESELTIDIEVGLGPAGELRYPSCTQNLGWVFPGIREFQCYDKYIKDDFKGAATRAGHPEREMPDNVGELNDAPESTKNFKSRGTYPTKKGKFFLTWYSNKLLIHGNEVLDRANNVFLGCKVKLAAKVNS 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01512 300 PANTHER BETA-AMYLASE 107 149 - -
Gma12g01512 300 PANTHER BETA-AMYLASE 153 299 - -
Gma12g01512 300 PANTHER - 153 299 IPR001554 GO:0000272|GO:0016161
Gma12g01512 300 PANTHER - 107 149 IPR001554 GO:0000272|GO:0016161
Gma12g01512 300 SUPERFAMILY (Trans)glycosidases 151 299 IPR017853 -
Gma12g01512 300 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 184 206 IPR001554 GO:0000272|GO:0016161
Gma12g01512 300 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 256 275 IPR001554 GO:0000272|GO:0016161
Gma12g01512 300 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 292 300 IPR001554 GO:0000272|GO:0016161
Gma12g01512 300 Gene3D Glycosidases 125 300 - -
Gma12g01512 300 MobiDBLite consensus disorder prediction 225 252 - -
Gma12g01512 300 Gene3D Transferase(Phosphotransferase) domain 1 1 124 - -
Gma12g01512 300 ProSitePatterns Serine/Threonine protein kinases active-site signature. 67 79 IPR008271 GO:0004672|GO:0006468
Gma12g01512 300 Pfam Protein kinase domain 4 119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01512 300 ProSiteProfiles Protein kinase domain profile. 1 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01512 300 Pfam Glycosyl hydrolase family 14 127 299 IPR001554 GO:0000272|GO:0016161
Gma12g01512 300 SUPERFAMILY Protein kinase-like (PK-like) 3 122 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01512 Gma-Chr12 32916082 32918024 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01512 141 300 Glycoside Hydrolase AT4G15210 60.000 3.83e-66 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gma12g01512 Glyco_hydro_14 1.7e-33 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01512 K01177 - gmx:100776742 256.144