Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01489 ATGGAAGCAGCCAACTGTTTGTCTTATGAAAGCCAATTTGGATGCCTCTATGAAGAAGAATATAGGGACTTCGGTGAAGTCGTTGCTGCAGCATCTTTGCGACATGTTCTTGTCAATGGCAAAGTTAGGATTGACAAGACTTACCCTGCTGGTTTCATGGATGTTGATTTCTTGCAGAATGAGTTAAAGTCAGTTAAGGAAATGGATAAAAGGGTTCAAGGAGATGGGAGTACAAAGCAATTGGAAGGAAGATTCAAAAAAGGGGAGGAATTAGAAGACTCTATAGTGTTACAAAATATAACAAAAGAATCGGAGGCAACTAGGAAAGAATTAGCTTTGGTTAGAGAAGAAGGTTTCCAGTTTATGGCCTCTTTGGATGTCATAAGAAATGAGTTGAAGCATGTCACTACTGAGACAAATAGGTTGAAGAAGAAGGAAGGGAAAGTAGACTCAACAATTCAAAATCTCAATTTCAAGATTTTGAGGGCAAAGTCTAAATTAGAAGTTGTGTATGCTGCTAAGGAAAAGGCCAGATCCATAGTCGTGAGTCTATCTCATACTCTTGAAAAGCTGAAGACAGAAACAGAAGAAGCAAAAAAGGAAAATGAGGATGTAAGCCAAGAAGTTGCAGCCACCAAGGAAGAAATTCAAAAAGTTGAGTTAGATATAGACATGACCGAGGAAAGATTGCAAGGCGTCATGCAAAAGCTAGAAGTAGCCAAAGCATCTGAAGCTCTAACCTTAGAGAAGCTGAAAACTCTTACTGAGAGTACCATGAGAGAAAGAGCTTTAACAGCACAGCATAGTTCCATGATCACTATCTCAAAATTTGAGTATGAGTATTTAACAAATCATGCAGCCTCAGCAGAAGAAATTCCTGATAAAAAAGTAGCAGCAGCTGAGGCATGGATTGAAGCTCTCAAGGCCAGCGAGAAGGAAATACTGATGGAAACAAAAATAGCTCAAAGAGAACTCAAAGAATCAAAATTGGAGCAAGAGCTGGAGGTTTACACCAAAGAGAAGATGCTTTCAAGAAGAGTTAGTAGTAGTGAGGAGCTTGACAATTGGCCAAGAAAACGCGAGAAGAGTTCATCCAAGAACTTCCAGAGAGCCATGTCTAGAAAGAGCATCAAACTTAATGGCACTATAACTCCTGCAAGGGGAGCAAAGTTTCAGAAGATTGCTTCACCTGCAGCTCGGCATATCAGTCCTTTTACTATTAAGAAGAGAAAGAAGGCCAAAGTAAAGCCACAACATTCGGAGAAGAGCAACAACAAATCTCATATGAATTTGATACCAAGTTGGATGCAGTTCCTGTAG 1320 0.3977 MEAANCLSYESQFGCLYEEEYRDFGEVVAAASLRHVLVNGKVRIDKTYPAGFMDVDFLQNELKSVKEMDKRVQGDGSTKQLEGRFKKGEELEDSIVLQNITKESEATRKELALVREEGFQFMASLDVIRNELKHVTTETNRLKKKEGKVDSTIQNLNFKILRAKSKLEVVYAAKEKARSIVVSLSHTLEKLKTETEEAKKENEDVSQEVAATKEEIQKVELDIDMTEERLQGVMQKLEVAKASEALTLEKLKTLTESTMRERALTAQHSSMITISKFEYEYLTNHAASAEEIPDKKVAAAEAWIEALKASEKEILMETKIAQRELKESKLEQELEVYTKEKMLSRRVSSSEELDNWPRKREKSSSKNFQRAMSRKSIKLNGTITPARGAKFQKIASPAARHISPFTIKKRKKAKVKPQHSEKSNNKSHMNLIPSWMQFL 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01489 439 MobiDBLite consensus disorder prediction 348 368 - -
Gma12g01489 439 MobiDBLite consensus disorder prediction 401 427 - -
Gma12g01489 439 PANTHER PROTEIN PLASTID MOVEMENT IMPAIRED 15 52 413 - -
Gma12g01489 439 MobiDBLite consensus disorder prediction 348 380 - -
Gma12g01489 439 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 52 413 - -
Gma12g01489 439 Coils Coil 97 117 - -
Gma12g01489 439 Coils Coil 181 243 - -
Gma12g01489 439 Coils Coil 320 340 - -
Gma12g01489 439 Coils Coil 125 145 - -
Gma12g01489 439 Pfam Weak chloroplast movement under blue light 80 360 IPR008545 -
Gma12g01489 439 Gene3D - 21 68 IPR036986 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01489 Gma-Chr12 30576281 30583107 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01489 17 55 Cytoplasmic Ribosomal Protein Gene Family AT2G17360 58.974 2.22e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01489 - - gmx:100809271 599.356