Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01481 ATGGCGAAAACGAGGCCAGGCAGAAAGGACGTGGACTCGTACACCATAAGAGGAACCAGCAAGATCGTCCGAGCTGGAGACTGTGTTCTGATGCGGCCCTCGGACACGTCGAAGCCGCCTTACGTGGCGCGCGTGGAGAAGATCGAGCAGGACAACAGGAGCAACGTGAAGGTGCGTGTGAGGTGGTACTACCGGCCAGAAGAGTCGATTGGTGGTCGGAGACAGTTCCACGGGGCTAAGGAACTGTTCCTCTCCGACCACTACGATGTGCAAAGTGCACACACCATTGAGGGCAAGTGTGTTGTGCACTCTTTTAAGAACTACACCAAGCTTGAGAATGTGGGTGCTGAGGATTACTATTGTAGATTCGAGTACAAGGCCGCCACCGGGGCTTTCACCCCTGACCGTGTTGCTGTGTATTGCAAATGTGAGATGCCTTATAACCCGGATGATCTCATGGTACAATGTGAAGGGTGCAAGGATTGGTTTCTTGTAGGTACCATCCTGCTTGCATGGGCATGA 522 0.5326 MAKTRPGRKDVDSYTIRGTSKIVRAGDCVLMRPSDTSKPPYVARVEKIEQDNRSNVKVRVRWYYRPEESIGGRRQFHGAKELFLSDHYDVQSAHTIEGKCVVHSFKNYTKLENVGAEDYYCRFEYKAATGAFTPDRVAVYCKCEMPYNPDDLMVQCEGCKDWFLVGTILLAWA 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01481 173 Gene3D - 2 134 IPR043151 -
Gma12g01481 173 Pfam BAH domain 23 135 IPR001025 GO:0003682
Gma12g01481 173 SMART BAH_4 21 136 IPR001025 GO:0003682
Gma12g01481 173 ProSiteProfiles BAH domain profile. 21 136 IPR001025 GO:0003682
Gma12g01481 173 SUPERFAMILY FYVE/PHD zinc finger 132 163 IPR011011 -
Gma12g01481 173 PANTHER OS08G0421900 PROTEIN 3 164 - -
Gma12g01481 173 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 135 168 IPR013083 -
Gma12g01481 173 PANTHER BNAC03G64850D PROTEIN 3 164 IPR045205 GO:0006325|GO:0035064
Gma12g01481 173 CDD BAH_BAHCC1 22 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01481 Gma-Chr12 29253308 29258573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01481 31 132 Core DNA Replication Machinery Family AT4G14700 29.126 6.58e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01481 K25868 - gmx:100800806 347.821