LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma12g01473	ATGGAAAGTAGTGATAATTTTTGTAGATTCGTGAATGGTGATGGTGACAATGATGTTACTGAGGTGTATGAAAATGATCATGCTGACGAAGATGATGTCAGACTTGAAGATGAGGAGGAGGTGGATTCTGAGGTACACAACGACGATTATGGAGATTATGATGATTTCTGGATTCCAGATTTGTTTAAAGAGGAATGTATAAGTATCGATACCGTAGTTGATATTAGAGAGTTTGACATGGAAAAAATTACCGTTGAAGATGTAAGCAGGTTGGATTTTGCTGAGTTGGAGTTAGCGTATCTCTTCTACTGTTGGTATGCTAAAATAACTGGTTTTTCTATAAGGAAGAGTCATATTGTTAGAAACACATGTAGGGAAACACTGCAACAAACATTTTTTTGTTCATGTGCTGGTTATAGGAGACATAAAGGATCAACGTCAAATAGAAGGAAGCGCCGAGAAAAAAAAAAAGAAAGCAGGAAGATGTCAGCAACTGATATTATGCAAATTGAAAACTATAGAAAAGTAGGCATTAGACCTCTGCACATGTACGCAGCATTTGCCAATCATTGTGGTGGATATGACAAAGTGGGGTTTATTAGGAAAGATATTTACAATCAAGAAGTGCACATGAGAAAGCAACATACCTCTGATGCAAGTGGTGCATTGAAGTATTTACATGATTTACGCAAAAAAGATCCAATTATGTATGTTTCGTACACCATGGATGAAGGGTCAAGACTACAACGATTGTTATGGTGTGATATTGAGAGCCAATTGCTTTATGAGGCATTTGATGACGTTCTCGCATTTGATGCCACCTATAAGAAAAATAAGTATTTGTGCCCTTTCGTTGTCTTCTCTGGTGTTAACCACTATAATTAG	885	0.3684	MESSDNFCRFVNGDGDNDVTEVYENDHADEDDVRLEDEEEVDSEVHNDDYGDYDDFWIPDLFKEECISIDTVVDIREFDMEKITVEDVSRLDFAELELAYLFYCWYAKITGFSIRKSHIVRNTCRETLQQTFFCSCAGYRRHKGSTSNRRKRREKKKESRKMSATDIMQIENYRKVGIRPLHMYAAFANHCGGYDKVGFIRKDIYNQEVHMRKQHTSDASGALKYLHDLRKKDPIMYVSYTMDEGSRLQRLLWCDIESQLLYEAFDDVLAFDATYKKNKYLCPFVVFSGVNHYN	294

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma12g01473	294	MobiDBLite	consensus disorder prediction	141	163	-	-
	Gma12g01473	294	PANTHER	OS02G0262500 PROTEIN	160	293	-	-
	Gma12g01473	294	MobiDBLite	consensus disorder prediction	143	158	-	-
	Gma12g01473	294	PANTHER	PROTEIN FAR1-RELATED SEQUENCE 10-RELATED	160	293	IPR031052	GO:0006355
	Gma12g01473	294	Pfam	FAR1 DNA-binding domain	102	158	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma12g01473	Gma-Chr12	28049966	28050982	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Gma12g01473		FAR1	5.2e-07	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma12g01473	-		-	gmx:102662272	412.92