Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01466 atgctggtgtatgagcacattccaaatggcactttgatggatagtctctcgggaaagtctggaatctggatggattggataaggaggcttaaagtagcattaggtgcagccagggggagtccatactggatggcacccgaggttgtaatgaatacaaatggctatagtcttcctgttgatatatggagtttgggatgcacaattcttgaaatggcaacatcaaagcctccttcgaatcagtatgaaggggtagctgcaatatttaaaattggtaacagcagagatatgcctgaaattCCTGAGATATGCCTCGGATCTTGGGTTCTTGAGCTCTCGTCTGAACGGCCTCAGAATCTGCTTCCCCAAATTGCCACCCACACCCCTCACTGCTTCTCCCTTCCCCACACCCCTCCCTATCGTTGCCAGGTTTTAAATATCACTATAGAAGCAGACCTTGGCTGCTACAGGGGATGCTGTAGTAAATAG 486 0.2016 MLVYEHIPNGTLMDSLSGKSGIWMDWIRRLKVALGAARGSPYWMAPEVVMNTNGYSLPVDIWSLGCTILEMATSKPPSNQYEGVAAIFKIGNSRDMPEIPEICLGSWVLELSSERPQNLLPQIATHTPHCFSLPHTPPYRCQVLNITIEADLGCYRGCCSK 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01466 161 ProSiteProfiles Protein kinase domain profile. 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01466 161 PANTHER MAP KINASE KINASE KINASE 37 101 - -
Gma12g01466 161 Gene3D Transferase(Phosphotransferase) domain 1 24 130 - -
Gma12g01466 161 SUPERFAMILY Protein kinase-like (PK-like) 1 104 IPR011009 -
Gma12g01466 161 Pfam Protein kinase domain 37 89 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01466 161 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 37 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01466 Gma-Chr12 27520008 27522115 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01466 38 101 MAP Kinase Kinase Kinase AT1G53570 81.250 4.04e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gma12g01466 Pkinase 2.6e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01466 K04421 - gmx:102660333 221.09