Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01465 ATGAAGCAAGGACACCAAGAGGAAGAAAGGTTCGGAAATCACTGTCCTGAACCTGATGAAGAAGGGTTGTTGGATTTCAAAGGTGGAGGAGGAGCAGTTCCTAatggaggagtttgtgaaggctttgatggtgGTTCTAATGGGCATTACTATGTACAACAGCCTATCCCATCGCCTCCCCTGGTAAACAACTATGGAAATGGGAATATGAGCATGCGGCATTTAGGCGCTTTTTTCAACTCAACTCAATTCAAAAGTGATCAGATATTTTTTACCTATGAAATGATTATGGAAATGACCAATGCATTTTCTACTCAAAATGTTATTGGGGAAGGAGGGTTTGGGTGTGTTTACAAAGGTTGGCTGCCAGATGGAAAAATAGTTGCAGTAAAGAAGCTTAAGGCTGGTAGTGGACAGGGAGAAAGGGAATTCAAGGCTGAAGTGGAGATCATCAGCCATGTTCATCATCGACATTTGGTGGCATTAGTTGGTTATTGCATATGTGAGCAGCAAAGAATTCTTATCTATGAGTATGTTTTCTTCAAAGATCATCACTTGCATGAAAGTGGAATGCCAGTGTTAGATTGGGCCAAGAGGCTAGAGATTGCAATAGGTGCTGCAAAGGGCTTAGCATATCTGCATGAGGATTGCAGCCAAAAGATTATTCACAGAGATATAAAGTCCGCAAACATACTTTTGGATAATGCTTATGAGGCACAGGTTTCTAACTTTGGACTTGCGAGGTTAGCTGATGCTGCCAATACCTATGTATCAACTAGGGTCATGGGAACCTTTGGCGATTATCTGTTCAAGCTTCTCCTAATCGGCGACTCTTCCGTTGGAAAATCCTGCTTGCTTCTCAGATTCGTTATGCTCAGGTTTTTTGGAATAGGTTACGACTCTCCCACTTTTGCCACTGCAATGTTTGATTTAATCCCTGCTTTTACCTTCATACTTGTCATCGTCTTCAGTATGGAAAAATTGGATTGGAAAGCTAACAGTACTCAGGCCAAGTCCATTGGCACATTGGTATCAATCGCTGGAGCCTTAATAATTACTCTGTACAAAGGCCAAGCAGTCATAAAGAATCATCCATCAAATAAATTGTTCCCCAAAAAACATGTTTCATCTGAGCAATTTGACTGGGTAATAGGGGCAGTGTTGCTTGCGGGTCATAGCTTTGTTCTCTCATTTTTGTTCATAACATGGATAATTAGAAATTACCTTGCAGAGCTTGTGATAGCAATAATTGGTGTATCCCTTCGAAGTATTGTTCATATATGGGTCATGAGCAAGAAGGGCCCTCTCTATGTGGCAATGTTTAAGCCAATTGGAATCATCTTTGCGGTCATCATAGGAATTGCCTTTCTTGGTGACTCTATCTATCTTGGAAGTGTGCTTGGAACAGCCATAGTGGTTATTGGTTTTTATGCTATTATTTGGGGGAAAAGCCAAGAGCAAGCAAAGGAAGAGTGTAAAGTCTATGATGACTCGGAATCATACTCGCCCATTGTCCCTCTTTTGGAGAACAAAAGAATGGAGGAATAG 1548 0.4044 MKQGHQEEERFGNHCPEPDEEGLLDFKGGGGAVPNGGVCEGFDGGSNGHYYVQQPIPSPPLVNNYGNGNMSMRHLGAFFNSTQFKSDQIFFTYEMIMEMTNAFSTQNVIGEGGFGCVYKGWLPDGKIVAVKKLKAGSGQGEREFKAEVEIISHVHHRHLVALVGYCICEQQRILIYEYVFFKDHHLHESGMPVLDWAKRLEIAIGAAKGLAYLHEDCSQKIIHRDIKSANILLDNAYEAQVSNFGLARLADAANTYVSTRVMGTFGDYLFKLLLIGDSSVGKSCLLLRFVMLRFFGIGYDSPTFATAMFDLIPAFTFILVIVFSMEKLDWKANSTQAKSIGTLVSIAGALIITLYKGQAVIKNHPSNKLFPKKHVSSEQFDWVIGAVLLAGHSFVLSFLFITWIIRNYLAELVIAIIGVSLRSIVHIWVMSKKGPLYVAMFKPIGIIFAVIIGIAFLGDSIYLGSVLGTAIVVIGFYAIIWGKSQEQAKEECKVYDDSESYSPIVPLLENKRMEE 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01465 515 Pfam Protein tyrosine and serine/threonine kinase 105 259 IPR001245 GO:0004672|GO:0006468
Gma12g01465 515 Gene3D Transferase(Phosphotransferase) domain 1 183 267 - -
Gma12g01465 515 Gene3D - 268 310 IPR027417 -
Gma12g01465 515 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Gma12g01465 515 MobiDBLite consensus disorder prediction 1 27 - -
Gma12g01465 515 SMART serkin_6 103 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01465 515 SUPERFAMILY Protein kinase-like (PK-like) 82 265 IPR011009 -
Gma12g01465 515 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK13-RELATED 44 266 - -
Gma12g01465 515 Gene3D Phosphorylase Kinase; domain 1 68 178 - -
Gma12g01465 515 ProSitePatterns Protein kinases ATP-binding region signature. 109 132 IPR017441 GO:0005524
Gma12g01465 515 MobiDBLite consensus disorder prediction 1 24 - -
Gma12g01465 515 ProSiteProfiles Protein kinase domain profile. 103 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01465 515 SUPERFAMILY Multidrug resistance efflux transporter EmrE 395 484 - -
Gma12g01465 515 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 44 266 - -
Gma12g01465 515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 267 300 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01465 Gma-Chr12 27404922 27416616 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01465 40 266 Trihelix Transcription Factor Family AT1G23540 60.944 2.37e-92 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Gma12g01465 PK_Tyr_Ser-Thr 6.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01465 - - gmx:100797563 411.379