Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01452 ATGATGATGTTGCGGTTAGTCTATGCTCTTATCTTGGGGTTTGTGGCTTTGAATTGCTTGCAAGTGTTTGAAGAATCCAATGCTCAACGCATACCGCGAGATGAAGTGAAAGCACTACAAGCAATATCGGATAAACTAGAGAACGTGAATTGGAAAGTCACAGAACGTTACTGCATAGAGGATGGAGGCTTCAATGGCAAGATTAATATAGACAATGACATCGTAAGGAATGTCACATGCGATTGCACTTTCCAAAATAAATCAGTTTGCCATGTTGATAAGATCTTTCTGAAGGGTCAAAATATATCAGGAGTTTTCCCCAGTGAATTTGGAAATCTCACACAACTGAAAGAACTTGATCTCACTCGCAACTATCTCAGTGGCTCACTTCCAACAAATTTTTCTCCCAACTCCCTGGTCGTTTTGTCCCTTCTGGGAAACCGACTAAGTGGACGAATTCCCACAGAAATCGGTGATATTGCTAGTCTTGAGGAACTGGTCTTAGAATGTAATCAACTTGAAGGCCCACTTCCACCTAGTTTTGGAAATTTGAGCAAGTTGAAGAGACTGCTTCTTTCTGCAAATAATTTTACAGGGACCATACCAGAAACATATAGCAAACTAAAGAATCTCACTGAGTTTAGGATAGATGGAAGCAGTTTATCTGGACCAATACCCAGTTTCATTGGGAACTGGACCAATCTTATCAGACTGGATTTGCAGGGAACAAATATGGAAGGCCCGATTCCTCCCACTATATCTCAGTTGAAACTTTTGACTGAATTGAGAATAACTGATTTGAATGGTGGACCAAGTATGACATTTCCTGATCTGAAGAATTTGACAAAATTGAAACGACTGGAATTGAGAAATTGCTTAATCACGGGTTCTATTCCAGGTTACATTGGAGAAATGGCAAACTTGGCTACTTTAGACCTAAGCTTTAACATGTTGACTGGTTCGGTCCCAGATTCAATACAAAAATTGGATAACCTAGACTACTTGTTCCTAACAAATAATTCTCTAAGCGGACCAATTCAGGACTGGATACTGAGCTTCAAGAATAATATAGATCTATCTTACAACAATTTTACAAACTCTTCTGCAACTAGCTGTCAGCTCTTGGATGTGAACTTGGCTTCAAGCCATTTTTCTTCAGCAGTAACTTCGGCGTCAACTTTTTGTTTGAAGAGGGACCTTCCTTGTGCAGAAAAACCCCAATACAAGTCATTGTTCATAAACTGTGGAGGAGATCAAGGGGTGTTTGAAGGCAATAACTATTTTGGTGACCTCCAGCAAAATGGGATTTCAAACTTTGTTCTTAGAAATGAAGCACAATGGGCTTATAGCAGCACAGGAGTATATTTGGGAAATGCTGATGCTGGTTTTATAGCACAAAATACGTTTTCTTTGAATATTACGGGTCCAGATTACTACCAAAATGCTCGCCTTTCCCCTCTGTCGCTTAACTACTATGGCCTTTGTCTTCCAAAGGGCAATTATAAAGTGAAGCTCCATTTTGCTGAGATAATGTTTTCTAATGATCAGACTTTTAGCAGTCTAGGAAGGCGCATATTTGATGTGTCAATTCAAGGTATTAGATATTTGAAAGATTTTAATATTATGGAAGAAGCTGGTGGAGTTGGAAAGAACATCACTAAGGAATTTGATGTTGATGTTGATGATGGCACCTTGGAAATCCACTTATACTGGGCAGGGAAAGGAACTACTGCCATTCCTGATAGAGGTGTATATGGACCTCTTATATCTGCTATCGAGATGATACCAAACTTTGAGAATCCTTCAAAAGGACTGTCTACTGGAGTCATTGTTGGAATTGTTGCTGCATCTTGTGGGCTTGTCATATTGATACTGGTTCTCCTTTGGAAGATGGGTTTCATTTGTAAGAAAGATACAACAGATAAAGAACTTCTAGAATTGAAAACGGGTTATTTCAGCTTAAGACAAATTAAAGCAGCTACTAATAACTTAGACCCTGCAAATAAGATAGGTGAAGGAGGATTTGGGCCTGTATACAAGGGTGTGTTGTCAGATGGTCATGTGATTGCTGTTAAGCAGCTCTCCTCCAAATCGAAACAAGGGAACCGTGAATTTGTCAATGAAATTGGAATGATATCTGCTTTGCAGCATCCAAATCTGGTGAAGCTTTATGGCTGTTGCATTGAAGGAAACCAGTTGCTACTAATATATGAATACATGGAGAACAACAGTCTTGCTCATGCACTTTTTGGTGAACAAGAGCAGAAGCTGCACTTGGATTGGCCCACAAGAATGAAGATCTGTGTGGGGATAGCAAGGGGATTGGCTTATCTTCATGAGGAGTCAAGGTTGAAAATAGTACACAGGGACATTAAGGCAACCAATGTCTTACTTGACAAGGATCTGAATGCCAAGATCTCTGACTTTGGTTTAGCTAAGCTTGATGAAGAAGAGAATACTCATATCAGTACACGTATAGCTGGAACAATTGGTTACATGGCTCCAGAATATGCTATGAGAGGTTACTTGACGGATAAAGCAGATGTATATAGCTTTGGAGTTGTAGCTTTAGAGATTGTCAGTGGAAAAAGCAACACAAAATACAGGCCAAAGGAGGAGTTTGTATATCTTCTAGATTGGGCATATGTTCTCCAAGAGCAAGGAAACCTTCTGGAATTGGTGGATCCAAATCTTGGTTCAAAATACTCCCCAGAGGAGGCCATGAGAATGCTGAGCTTGGCACTCTTATGTACCAATCCATCTCCCACTCTTAGACCAACCATGTCATCTGTAGTGAGCATGCTTGAAGGAAAAATTCCAATCCAAGCGCCGATAATCAAGCGCAGTGAGAGCAACCAAGATGTAAGATTTAAAGCCTTCGAATTGCTATCACAAGACAGCCAAACTCTTGTTTCTTCCGCATACTCACAAGAAAGTATGAAGCAAAGACACATATCAGAAGATGGACCATGGGTTGACTCCTCCATATCTCTTCCAAGTGGAGATGATTATTCTTCAACCAGTAAACTTGTTTAA 3036 0.3999 MMMLRLVYALILGFVALNCLQVFEESNAQRIPRDEVKALQAISDKLENVNWKVTERYCIEDGGFNGKINIDNDIVRNVTCDCTFQNKSVCHVDKIFLKGQNISGVFPSEFGNLTQLKELDLTRNYLSGSLPTNFSPNSLVVLSLLGNRLSGRIPTEIGDIASLEELVLECNQLEGPLPPSFGNLSKLKRLLLSANNFTGTIPETYSKLKNLTEFRIDGSSLSGPIPSFIGNWTNLIRLDLQGTNMEGPIPPTISQLKLLTELRITDLNGGPSMTFPDLKNLTKLKRLELRNCLITGSIPGYIGEMANLATLDLSFNMLTGSVPDSIQKLDNLDYLFLTNNSLSGPIQDWILSFKNNIDLSYNNFTNSSATSCQLLDVNLASSHFSSAVTSASTFCLKRDLPCAEKPQYKSLFINCGGDQGVFEGNNYFGDLQQNGISNFVLRNEAQWAYSSTGVYLGNADAGFIAQNTFSLNITGPDYYQNARLSPLSLNYYGLCLPKGNYKVKLHFAEIMFSNDQTFSSLGRRIFDVSIQGIRYLKDFNIMEEAGGVGKNITKEFDVDVDDGTLEIHLYWAGKGTTAIPDRGVYGPLISAIEMIPNFENPSKGLSTGVIVGIVAASCGLVILILVLLWKMGFICKKDTTDKELLELKTGYFSLRQIKAATNNLDPANKIGEGGFGPVYKGVLSDGHVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYMENNSLAHALFGEQEQKLHLDWPTRMKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTKYRPKEEFVYLLDWAYVLQEQGNLLELVDPNLGSKYSPEEAMRMLSLALLCTNPSPTLRPTMSSVVSMLEGKIPIQAPIIKRSESNQDVRFKAFELLSQDSQTLVSSAYSQESMKQRHISEDGPWVDSSISLPSGDDYSSTSKLV 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01452 1011 MobiDBLite consensus disorder prediction 975 1011 - -
Gma12g01452 1011 Gene3D Transferase(Phosphotransferase) domain 1 740 956 - -
Gma12g01452 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Gma12g01452 1011 Gene3D Ribonuclease Inhibitor 270 393 IPR032675 -
Gma12g01452 1011 SMART serkin_6 664 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01452 1011 PANTHER - 70 996 - -
Gma12g01452 1011 SUPERFAMILY L domain-like 75 369 - -
Gma12g01452 1011 Gene3D Phosphorylase Kinase; domain 1 630 739 - -
Gma12g01452 1011 SUPERFAMILY Protein kinase-like (PK-like) 647 936 IPR011009 -
Gma12g01452 1011 Pfam Leucine rich repeat 162 219 IPR001611 GO:0005515
Gma12g01452 1011 Pfam Leucine rich repeat 283 342 IPR001611 GO:0005515
Gma12g01452 1011 Gene3D Ribonuclease Inhibitor 35 202 IPR032675 -
Gma12g01452 1011 Gene3D Ribonuclease Inhibitor 203 269 IPR032675 -
Gma12g01452 1011 Pfam Malectin domain 410 592 IPR021720 -
Gma12g01452 1011 CDD STKc_IRAK 670 937 - -
Gma12g01452 1011 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 70 996 - -
Gma12g01452 1011 Pfam Protein tyrosine and serine/threonine kinase 668 935 IPR001245 GO:0004672|GO:0006468
Gma12g01452 1011 ProSiteProfiles Protein kinase domain profile. 664 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01452 1011 Pfam Leucine Rich Repeat 115 139 IPR001611 GO:0005515
Gma12g01452 1011 Gene3D - 410 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01452 Gma-Chr12 26227931 26244266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01452 19 1002 Receptor kinase-like Gene Family AT1G53440 61.847 0.0 1212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma12g01452 PK_Tyr_Ser-Thr 1.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01452 - - gmx:100815226 2014.19