Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01449 ATGATGACAACAATAAAATGGATTGACATTACAAATTTTGTCAGACCAGATGAAAGGCTTAATGATATTGTTGGAAGTGCATACTATGTGGCCCCTGAAGTTCTCCATAGATCTTATGGCACAGAGGTTGATGTGTGGAGTATAGGTGTGATAACATATATTTTATTATGTGGCAGTCGTCCATTTTGGGCCCGAACAAAGTTTGGTATTTTTATGGTAGTTTTGAAAGCTAATCCAAGCTTTGACAAAACACTGTGGCCATCTTTGTCTTTAGAAGCTAAAGATTTTGTCAAACGCATATTGAATAAGGATCCACAGAATCGAATATCTGCTGCTCAGGCTCTAAGTGAGTTATTTTTCTTGCCTCTATCATCAATTTCAATAATATCTAGTAAGACATTTTTCAAGTTGTCAGCCATAATCTTGTGCTTGCAGGCCTTGTCAAAAACATTGACTGCTGATGAACTCTATTATCTGAGAGAGCAATTTGCACTGCTAGAACCAAGAAAAAATGGTAGTATATCTTTAGAGAACGTTAACAAGGTTGGTTATCACTTCAATGTGTCATGTATGAAAATTATCCCTTTGTTGGATTCCACAAAATTTTGTGCAGCTGCATTGAGTGTGCATCAACTTGAAGCTCTTTATCGTTGGGAACAACATGCCCGCTGTGCATATGAACTCTTTGATAAAGACAAAAATAGGGCTATTGTCATTGAAGAGCTTGCTTCAGAACTTGGACTTGGTCCCTCTATCCCTGTTCATGTCGTTCTTCATGATTGGATACGCCATACTGATGGCAAGTTAAGTTTTCTTGGGTTTGTCAAATTTAAAGCAAAAGCCCTATGGATATGCTGA 858 0.3753 MMTTIKWIDITNFVRPDERLNDIVGSAYYVAPEVLHRSYGTEVDVWSIGVITYILLCGSRPFWARTKFGIFMVVLKANPSFDKTLWPSLSLEAKDFVKRILNKDPQNRISAAQALSELFFLPLSSISIISSKTFFKLSAIILCLQALSKTLTADELYYLREQFALLEPRKNGSISLENVNKVGYHFNVSCMKIIPLLDSTKFCAAALSVHQLEALYRWEQHARCAYELFDKDKNRAIVIEELASELGLGPSIPVHVVLHDWIRHTDGKLSFLGFVKFKAKALWIC 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01449 285 ProSiteProfiles Protein kinase domain profile. 1 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01449 285 Pfam Protein kinase domain 13 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01449 285 Gene3D Transferase(Phosphotransferase) domain 1 4 133 - -
Gma12g01449 285 Gene3D - 152 207 - -
Gma12g01449 285 PANTHER CDPK-RELATED KINASE 2 6 277 - -
Gma12g01449 285 SUPERFAMILY Protein kinase-like (PK-like) 14 136 IPR011009 -
Gma12g01449 285 SMART serkin_6 1 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01449 285 Gene3D - 142 276 - -
Gma12g01449 285 SUPERFAMILY EF-hand 145 277 IPR011992 -
Gma12g01449 285 PANTHER SERINE/THREONINE-PROTEIN KINASE 6 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01449 Gma-Chr12 25755226 25757847 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01449 17 277 EF-hand Containing Proteins AT3G50530 64.664 1.80e-121 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gma12g01449 Pkinase 6.1e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01449 - K00924 gmx:100807672 384.8