Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01428 ATGAAGTTCATGAAGCTTGGTTCTAAGCCTGATACCTTTCAGACTGATGGGAACATTGTTAGTTCTCATAATGGCATCAATGTGCCAGATGCCAATCTTGTTCCGATTTCATGCACTTCTGATGTCATAAATTTGATGAACTTGGGATACAAGAATCGTGTAGTTGGTTCTACTGCCATGAATGATCGCTACTCTCTATTTTCAGCTGTGATTGTTGCTATGCCATGCCCTTCCACTATGCCTCGTGCTTGGACTTTCTTTTTGCTTGATCAGGAAGTAAATTTACCTGTTGAAGAACTTCCTTCAGAGCTTCCTGAGCCTGTCCTGGGCATTAACTTTGCTAGGGATGGCATGCAGGAAAAAGACTGGTTATCTTTAGTTGTTGTTCATAGTGATACATGGCTACTTGCCCTTGCCTTTTACTTCGGAGCCAGATTTGGATTTGATAAAACTCACAGGAATAGACTATTCAGTATGATCAATGAACTACCAACAATATTTGAAGTTGTTACTAGTGCAGCAAAGAAACAAGTTAAAGAGAAGTCTTCGGTTTCAAACAACAGTGGCAGCAAATCTAAATCTAGGTCTAACTTGTATGATTTCATTTCTTGTATCTAG 618 0.3948 MKFMKLGSKPDTFQTDGNIVSSHNGINVPDANLVPISCTSDVINLMNLGYKNRVVGSTAMNDRYSLFSAVIVAMPCPSTMPRAWTFFLLDQEVNLPVEELPSELPEPVLGINFARDGMQEKDWLSLVVVHSDTWLLALAFYFGARFGFDKTHRNRLFSMINELPTIFEVVTSAAKKQVKEKSSVSNNSGSKSKSRSNLYDFISCI 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01428 205 PANTHER CPG BINDING PROTEIN 90 197 IPR045104 GO:0006355|GO:0042393
Gma12g01428 205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 71 IPR027417 -
Gma12g01428 205 Gene3D Kinesin motor domain 8 75 IPR036961 -
Gma12g01428 205 Pfam Alfin 92 171 IPR021998 GO:0006355|GO:0042393
Gma12g01428 205 PANTHER ALFIN-LIKE TRANSCRIPTION FACTOR 90 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01428 Gma-Chr12 24733754 24737244 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01428 92 198 Alfin-like Transcription Factor Family AT5G20510 68.224 1.41e-41 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01428 - - gmx:100170696 149.443