Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01427 ATGTCTGTCAATGACGCTGATCAATCCAATAAGGCTCACAGAACTCGTCAATCTGCCAAGCGCTTGCAATCACACATCGTCGAGAAAGAGCAACGCCGCCTCCACGCTCCCGTCATCGACCGCTCCTACGACGAGCTTGCTCCCTACGTGCTCGTCGTGCATAGCCCTCCTCAGGTTGGGAAGTCACCGTTGATAAATTCTTTGATAAAGTTTTTGTGTCTCTGCCACCTTGGTCTCCTGCAGTTGGATCGTGCTCAAGAATACATCAACGAGGCTGAAAAGCTTGAGCCTAACATTGTCTGTGCTTTTCTTAAGTTGAGTTGCAGAAGTGTGTGCGAGTTTGAGATGATTAAGAAAATAAACAAAGGAACTTATGGTGTTGTCTACAAGGCTAGGGATAAGAAGACAGGAGAACTAGTAGCATTGAAGAAGGTGATGAACATAGAGAGGGATGGATTTCCAATGTCATCCTTGAGAGAAATAAACATTCTCTTGTCTTTTAATCACCCCTCCATTGTGAATGTTGAAGAAGTAGTTGTTGATGATTTTGATGGTACTTTTTATGGTAATGGAGCACATGAAGTATGA 588 0.4388 MSVNDADQSNKAHRTRQSAKRLQSHIVEKEQRRLHAPVIDRSYDELAPYVLVVHSPPQVGKSPLINSLIKFLCLCHLGLLQLDRAQEYINEAEKLEPNIVCAFLKLSCRSVCEFEMIKKINKGTYGVVYKARDKKTGELVALKKVMNIERDGFPMSSLREINILLSFNHPSIVNVEEVVVDDFDGTFYGNGAHEV 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01427 195 PANTHER CYCLIN-DEPENDENT KINASE 89 187 - -
Gma12g01427 195 SUPERFAMILY Protein kinase-like (PK-like) 108 183 IPR011009 -
Gma12g01427 195 MobiDBLite consensus disorder prediction 1 23 - -
Gma12g01427 195 PANTHER CELL DIVISION PROTEIN KINASE 89 187 - -
Gma12g01427 195 Pfam Protein kinase domain 114 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01427 195 Gene3D Phosphorylase Kinase; domain 1 103 190 - -
Gma12g01427 195 ProSiteProfiles Protein kinase domain profile. 114 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01427 Gma-Chr12 24723905 24724866 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01427 106 180 Core Cell Cycle Gene Families AT5G10270 47.368 3.53e-17 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Gma12g01427 Pkinase 7.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01427 K08818 - gmx:100788840 150.214