Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01423 ATGGAAGAGGATGAAGAGACGCAGCAACGAGTCACTGACTCGTCCCTCTCCACCGAGTCACGCACTTCCACTCCTTCTGATGGAGCGCCACCCAACTCGGAAACCCTAGTTCACCGCTCCTCGCTTCCGCATGACCTTGCCACTCATATGCAGGGCAGCTCTACCGCACATAAAGGTGGAAAAGCTGAGAGTAAGGTGTCAGCTCAGCCTCCTGATGAGGAAACTATTGAAAAAGATGCAGTTGAGGCACCTCAAAAACAGACAGAAAATCAACTTCAGTCTGTTTGTTCAACTTCATTATCTGAACTATCACCAACTTCTGTTTCACATTCTTTATCATCTGCCCTTAGTCCCACTGTATCACAACAGAGACCATCTCCTCCCAAGGCTAATAGTGTACAAGTGTCGAAAGGAGACAAAGGAACACCTTCTGATGGTACAACCTTATCTTCTGTTTCTGCTGTAAGGGCATCTGCATCTGATGGATACAACTGGCGGAAGTACGGCCAGAAGCAAGTGAAGAATCCTATGGGTTCTCGAAGCTATTACAAGTGTACCCATTCAAATTGTTGTGCTAAGAAGATTAAATTTTGTGACCATTCAGGACATGTGATAGAGATTGTTTATAAAAGTCAACATAATCATGATCCTCCGCATAAAATTGATACCACCAAGGAAAGTAAGCTCCTGCCTTCCAGTGAACCTAAAGAAGAAAGCAGTGTTCCAAAGCAGTCTACCAAAGTTCTGAATAATTCTGATCCATCATCTTCTCCGAAAGAACCTTTGCAAGAAGCACCCTGCAATGGTGATAAGAATCTAGAAAACTCATCTAATGTTGAGAATGGTAAAATTATTTTGAAGGAAAAGCATGTCAATGACCGAGAGCCAAAAAGAAGATTGAACAATGGTGATTTGGATTCAGCAGTAAAACATGGCAAGAAACCAAAGTTTGTTGTACATGCGACAGAGGATGTGGGGATATCAGGTGATGGATACCGGTGGCGCAAGTATGGACAAAAGTTGGTGAAGGGAAATCCACATTTCAGAAACTACTACAGATGCACTTCTTCTGGATGTCCTGTCCGAAAGCACATTGAGACTGCTGTGGATAATTCAAAAGCTCTCATCATAACATACAAGGGAGTGCATGATCATGACATGCCTGTACCCAAGAAACGACATGGCCCGCCTAGTGCTTCACTTGTGGCTGCGGCAGCACCTGCTTCAATGAACAATGTGCAGTTCAAAAAAACTGGCTTGCTGCAAAGCCAGGAAACTGAAGCTCAATGTTCAGAGGACACAGAAGGAGAATTGATGGGGGAAGCGATGGACCTTGAGGGTGAGAAAGCAATTGAGTCGGCTCGAACTCTTTTGAGCATAGGTTTTGAAATTAAACCTTGTTGA 1404 0.4402 MEEDEETQQRVTDSSLSTESRTSTPSDGAPPNSETLVHRSSLPHDLATHMQGSSTAHKGGKAESKVSAQPPDEETIEKDAVEAPQKQTENQLQSVCSTSLSELSPTSVSHSLSSALSPTVSQQRPSPPKANSVQVSKGDKGTPSDGTTLSSVSAVRASASDGYNWRKYGQKQVKNPMGSRSYYKCTHSNCCAKKIKFCDHSGHVIEIVYKSQHNHDPPHKIDTTKESKLLPSSEPKEESSVPKQSTKVLNNSDPSSSPKEPLQEAPCNGDKNLENSSNVENGKIILKEKHVNDREPKRRLNNGDLDSAVKHGKKPKFVVHATEDVGISGDGYRWRKYGQKLVKGNPHFRNYYRCTSSGCPVRKHIETAVDNSKALIITYKGVHDHDMPVPKKRHGPPSASLVAAAAPASMNNVQFKKTGLLQSQETEAQCSEDTEGELMGEAMDLEGEKAIESARTLLSIGFEIKPC 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01423 467 MobiDBLite consensus disorder prediction 1 153 - -
Gma12g01423 467 ProSiteProfiles WRKY domain profile. 154 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma12g01423 467 MobiDBLite consensus disorder prediction 85 153 - -
Gma12g01423 467 SUPERFAMILY WRKY DNA-binding domain 322 388 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma12g01423 467 MobiDBLite consensus disorder prediction 237 262 - -
Gma12g01423 467 MobiDBLite consensus disorder prediction 11 39 - -
Gma12g01423 467 MobiDBLite consensus disorder prediction 210 233 - -
Gma12g01423 467 MobiDBLite consensus disorder prediction 283 311 - -
Gma12g01423 467 PANTHER WRKY TRANSCRIPTION FACTOR 32-RELATED 4 465 - -
Gma12g01423 467 Pfam WRKY DNA -binding domain 330 385 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma12g01423 467 Pfam WRKY DNA -binding domain 161 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma12g01423 467 Gene3D WRKY domain 146 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma12g01423 467 Gene3D WRKY domain 313 389 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma12g01423 467 SUPERFAMILY WRKY DNA-binding domain 158 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gma12g01423 467 SMART WRKY_cls 159 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma12g01423 467 SMART WRKY_cls 328 387 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma12g01423 467 MobiDBLite consensus disorder prediction 210 311 - -
Gma12g01423 467 MobiDBLite consensus disorder prediction 67 84 - -
Gma12g01423 467 MobiDBLite consensus disorder prediction 46 60 - -
Gma12g01423 467 ProSiteProfiles WRKY domain profile. 323 388 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gma12g01423 467 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 4 465 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01423 Gma-Chr12 24476451 24485898 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01423 63 467 WRKY Transcription Factor Family AT4G30935 49.637 3.16e-115 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gma12g01423 WRKY 1.6e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01423 - - gmx:100127388 870.922