Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01390 ATGGGTGTCAAATATGTCAAGGGAGGGGAACTCTTTGCCAAGGTTGTAAAGGGGAAGATGAAGGACGACATCTCCAGAAAGTGCTTTCAGCAACTCATTAGTGCCGTTGATTTCTGCCATGACCGTGATGTCACTCACCACGATTTGAAGTTAGAGAATTTTCTCCTCGAAGAGAATGAAGACCTTAAAGGCCAAAAGTTGATCTCTAATTTACTCACTATGGACCCACGAAAGAGGTATTCTATTCCTGACATCATGAAGGACCCTAGGTTTCAAATTGGGTTCATGAGGCCCATTGCTTTTTCCGTGAAGGAGTCAGTGGTGGAAGATAACATTGATTTCAATAGGGATGATGTTCCTAATGTGAATTGTAATAGCAATGGTGGTGGTAATAGCAACAACAACGATGATGAGGAAGTGATTATGGTGTACCATTGCTGGAAATTGTCTTAG 453 0.4194 MGVKYVKGGELFAKVVKGKMKDDISRKCFQQLISAVDFCHDRDVTHHDLKLENFLLEENEDLKGQKLISNLLTMDPRKRYSIPDIMKDPRFQIGFMRPIAFSVKESVVEDNIDFNRDDVPNVNCNSNGGGNSNNNDDEEVIMVYHCWKLS 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01390 150 PANTHER - 3 63 - -
Gma12g01390 150 Pfam Protein kinase domain 3 63 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01390 150 PANTHER - 65 113 - -
Gma12g01390 150 Gene3D Transferase(Phosphotransferase) domain 1 1 64 - -
Gma12g01390 150 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 25-RELATED 65 113 - -
Gma12g01390 150 ProSiteProfiles Protein kinase domain profile. 1 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01390 150 SUPERFAMILY Protein kinase-like (PK-like) 4 92 IPR011009 -
Gma12g01390 150 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 25-RELATED 3 63 - -
Gma12g01390 150 ProSitePatterns Serine/Threonine protein kinases active-site signature. 44 56 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01390 Gma-Chr12 22047766 22048551 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01390 3 63 CBL-interacting serine-threonine protein kinases AT5G25110 70.492 1.20e-23 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gma12g01390 Pkinase 3.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01390 - K07198 gmx:100804244 100.523