Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01374 ATGGAGAGCACCGAAGACTCATCCACGAGTTCACAGCAACAACCGAACCTGCCACCCGGGTTTCGGTTCCACCCCACAGACGAGGAGCTCGTGGTTCATTACCTCAAGAAGAAAGTAGATTCTGTTCCTCTCCCTGTTTCAATCATCGCTGATGTTGATCTCTACAAGTTTGATCCATGGGAATTACCAGCCAAAGCATCGTTTGGGGCGGAAGAGTGGTACTTTTTCAGCCCGAGAGAAAGGAAGTACCCGAATGGCGCGAGGCCAAACAGGGCTGCAACTTCAGGGTATTGGAAAGCCACGGGGACAGATAAGCCTATATGTAGTGGAACTCAAAAGGTTGGGGTGAAGAAATCTTTGGTTTTCTATGGAGGGAAGCCACCAAAAGGGGTAAAAACCGATTGGATCATGCATGAGTACCGTGTTACTGAAAACAAGCCAAACAATAGGCCTCCTGGGTGTGACTTGGGCCACAAGAAAAACTCCCTAAGGCTGGATGATTGGGTGTTGTGCCGAATCTACAAGAAGGGCAACACACAAAGGTCACATGAGAGGGACGATTCCATTGATGACATGATTGGAGAAGTACCTCCTTCCATCAACGTGGGCCACATGAGTGCGAGGTTTCACCTTTCAAGGATGTCCACGAGCTACAGTGGTGCATTGTTGGAAAATGACAGAAACACGTTAGAAGGGGTGGTTATAGGCAATGGTAGTGTGAATGGGATCAGCAATACTAATAATATTACAAGTGTCATATCATCATCTCATCAGTTTGGCACCTCAAACTCCAAGGCAGAGCTTCTTCCTTTTGTCCCTTCAAACAACACTTCTAATTCGGCCTCCAAAAGAACACTCTCATCACTCTATTGGAATGTTGATGATCACAAACACTTCAATTTGGACAGTAATGGGAATGTGAGTGTTTTGAGGACAGATCAAGAGAATAATAATAATAATAATGGTACTTCTGGCTCCTTTGCTACTCTGCTTAACCAGCTTCCACAAACACCTTCATTGCCCCAAATAGATGGGTTACTTCGGACACCGTATCAAATACAAGGGACCAATTGGTATGGTTAA 1083 0.4552 MESTEDSSTSSQQQPNLPPGFRFHPTDEELVVHYLKKKVDSVPLPVSIIADVDLYKFDPWELPAKASFGAEEWYFFSPRERKYPNGARPNRAATSGYWKATGTDKPICSGTQKVGVKKSLVFYGGKPPKGVKTDWIMHEYRVTENKPNNRPPGCDLGHKKNSLRLDDWVLCRIYKKGNTQRSHERDDSIDDMIGEVPPSINVGHMSARFHLSRMSTSYSGALLENDRNTLEGVVIGNGSVNGISNTNNITSVISSSHQFGTSNSKAELLPFVPSNNTSNSASKRTLSSLYWNVDDHKHFNLDSNGNVSVLRTDQENNNNNNGTSGSFATLLNQLPQTPSLPQIDGLLRTPYQIQGTNWYG 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01374 360 MobiDBLite consensus disorder prediction 1 19 - -
Gma12g01374 360 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 340 - -
Gma12g01374 360 SUPERFAMILY NAC domain 8 176 IPR036093 GO:0003677|GO:0006355
Gma12g01374 360 MobiDBLite consensus disorder prediction 1 22 - -
Gma12g01374 360 ProSiteProfiles NAC domain profile. 17 176 IPR003441 GO:0003677|GO:0006355
Gma12g01374 360 PANTHER NAC TRANSCRIPTION FACTOR 56 1 340 - -
Gma12g01374 360 Pfam No apical meristem (NAM) protein 18 142 IPR003441 GO:0003677|GO:0006355
Gma12g01374 360 Gene3D NAC domain 26 181 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01374 Gma-Chr12 21604150 21606744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01374 1 359 NAC Transcription Factor Family AT3G15510 52.151 7.56e-114 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma12g01374 NAM 5.8e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01374 - - gmx:100811670 700.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01374 12 21604150 21606744 Gma12g01374 12 21604150 21606744 ECH