Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01371 ATGCAAGAAATCACCAATGTGGGTGGAGCTGGTGATATGAATTCAGTGTCCATCAAAGGGTCCAAAACAGGGTGGAAACCCATGTCAAGGAATTGGGGGCAAAATTGGCAGAGAAACTCATACCTCAATGGGCAATCCCTCTCTTTTCAAGTCACCACCAGTGATGGCAGAACTGTGAAAAGCTTCAATGTGGCACAATCCAATTGCCAATTTAAAGTGAGGGCGAGCATGATCAACACAACCATAGAAATTTCTACCTAA 261 0.4406 MQEITNVGGAGDMNSVSIKGSKTGWKPMSRNWGQNWQRNSYLNGQSLSFQVTTSDGRTVKSFNVAQSNCQFKVRASMINTTIEIST 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01371 86 MobiDBLite consensus disorder prediction 1 30 - -
Gma12g01371 86 Pfam Expansin C-terminal domain 4 65 IPR007117 -
Gma12g01371 86 PANTHER EXPANSIN 4 72 - -
Gma12g01371 86 PANTHER EXPANSIN-A15 4 72 IPR002963 GO:0009664
Gma12g01371 86 SUPERFAMILY PHL pollen allergen 4 71 IPR036749 -
Gma12g01371 86 Gene3D - 1 79 IPR036749 -
Gma12g01371 86 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 1 68 IPR007117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01371 Gma-Chr12 21542773 21543033 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01371 4 67 Expansin Gene Family AT1G26770 76.562 1.32e-29 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01371 - K20628 gmx:100499976 128.642