Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01365 ATGGTCCTTGCAGCAACTTATCGTCCTTCAGAACTTGATGAAGCAATACTTCAGCATCTTCCTCAAGCCTTTGAAATTGGAGTTCCAGACCAAAGGGAGAGGATTGAAATATTGAAAGTTGTCTTAAAGGGTGAGAGGGTTGAAGACAACATAGACTTTGGTCATATAGCTGGCTTGTGTGAGGGTTACACTAGTTTAGATCTATTTGATCTTTGCAAGAAAGCTACCTATTTTCCTATTATAGAACTACTGGATGAAGAAAAGAAAGGAAAACGATCTCATGTTCAATTCAAGTTCTTTGGCTTGTCCCCTAAGGTTGATGGTGTCCTTGGGAGGACTTATAGGGATGATTTTGAGAACCCAACAAAGCCTGGTGTGGCAATGCTTGTTGTTAGAGGAGAGGACAAACACAAGACCACCTCTTTGCTTTCTCCAAATTGTGCTTCTTGTGTCTTTTCACAACAAAACTCACATAAGAATGAGCCCACTAAAGTAAGTGCAAAATTAATGGGCACCCTTGATTGCTCCAAGTTTTCTTATGGCTTGGGAATCGTTTGCAAGAAATGA 567 0.4039 MVLAATYRPSELDEAILQHLPQAFEIGVPDQRERIEILKVVLKGERVEDNIDFGHIAGLCEGYTSLDLFDLCKKATYFPIIELLDEEKKGKRSHVQFKFFGLSPKVDGVLGRTYRDDFENPTKPGVAMLVVRGEDKHKTTSLLSPNCASCVFSQQNSHKNEPTKVSAKLMGTLDCSKFSYGLGIVCKK 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01365 188 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 92 - -
Gma12g01365 188 Pfam Root cap 96 152 IPR009646 -
Gma12g01365 188 Gene3D - 1 28 IPR027417 -
Gma12g01365 188 Gene3D - 29 91 - -
Gma12g01365 188 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-LIKE 1 92 - -
Gma12g01365 188 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 86 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01365 Gma-Chr12 21210485 21215956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01365 1 86 Calmodulin-binding Proteins AT3G56690 33.708 3.73e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01365 K22530 - gmx:100788677 171.014
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01365 12 21210485 21215956 Gma12g01365 12 21210485 21215956 ECH