Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01364 ATGGAACAAAATGCGTGCAAGGAATTGTCAAAAATTGCTTCGAATTTCAAGTGCGAGAAGGTTCTCGAAACAGTTGATGAATCAATCGTATGCCCCACTCCACAAAAGAACGAGGAACCCCTAACTGTCAAATCCAAAGAGGGACAAACCAACCTTCCTGAAAAGTGCTCCAATTTTCAAAATGTTTGCCGCCAGGTTGAAGTTCTTTCGAAGAGGAAATTCTCCCATGCCCATCTTACGCAGATGAAGTATATACTCCCTAAAAGTGTGTATATAGATAGGGTGCTTGTTCATGATAAGAAAAGCTTGTGTATGGTGCCTGATATGAAGATCACCTTGAAATTTGAGGTTGTGAAAGATTGCTTTGGCGAATCTGCTGATCTGGCTCTTCGACGATATTTTAAATCTAAGCTGATTGATTTCTTTGATATGCATCCTGAGGACATGCCTACCCAAAAGTCAACATCATCTTATAAGCCAGCAAAAAGAGTGCTTGACTTTTCCCTCATGGAGGACAATGATGGCTTGGGCATTGAAATGGACAAGTTAGAATCTATCAGAGCTCTGCATGAATCTAGCAGAGGATGTTATGAGGATTGCAACTCTTTTGGTTCTGTTTCTGCACCTCAGGAGGCAAGAAATAATGCTCGGATATTGATCTCTGGCTCATTCAGCAACCGGTATGAAAGGATCACACGGTGTGCAAAAGGCTGGGAGTCCAACCAAGTATATGATCGGAAGTCTCAAAGGCTTGTTGAAAAAATAATTGACAAAAAAATTGTATTGTCCATGAGAGCCATTTATCAGTCAAAAATTTGTTTATTTTGTTAA 831 0.4019 MEQNACKELSKIASNFKCEKVLETVDESIVCPTPQKNEEPLTVKSKEGQTNLPEKCSNFQNVCRQVEVLSKRKFSHAHLTQMKYILPKSVYIDRVLVHDKKSLCMVPDMKITLKFEVVKDCFGESADLALRRYFKSKLIDFFDMHPEDMPTQKSTSSYKPAKRVLDFSLMEDNDGLGIEMDKLESIRALHESSRGCYEDCNSFGSVSAPQEARNNARILISGSFSNRYERITRCAKGWESNQVYDRKSQRLVEKIIDKKIVLSMRAIYQSKICLFC 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01364 276 PANTHER EXPRESSED PROTEIN 5 149 - -
Gma12g01364 276 PANTHER EXPRESSED PROTEIN 148 216 - -
Gma12g01364 276 Pfam DNA replication factor CDT1 like 55 93 IPR014939 -
Gma12g01364 276 PANTHER DNA REPLICATION FACTOR CDT1 5 149 IPR045173 GO:0003677|GO:0030174|GO:0071163
Gma12g01364 276 PANTHER DNA REPLICATION FACTOR CDT1 148 216 IPR045173 GO:0003677|GO:0030174|GO:0071163
Gma12g01364 276 SUPERFAMILY "Winged helix" DNA-binding domain 55 148 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01364 Gma-Chr12 21204062 21207584 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01364 58 147 Core DNA Replication Machinery Family AT2G31270 40.860 9.66e-21 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01364 K10727 - gsj:114379642 325.865