Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01353 ATGGTGTTATCGGCTTCGCCATGTTCCTTGGCGAGAAGCTCGCTAGAGGAGATGCTCGATTCCCTTCGCCGGAGGGACGAGGAGGAGGAGAAGAAGGACTCGCCACCGGCGTTGCCCGCGAGGCCGGCCTCGCGGGCACGGCTTCCTCCGGCACGGCGGTCGCTGCCGAACAACTTCAGGGTTGGCGGCAGCCAGCGCGTCATCGCGCCCGAAAATGGAGTCGGTACTAATGGGGAGAGTGACTTGAAGGAGAATGACTTGGGGCAGAAAAGGAGAAGAAATTGTTTTGAGAGAAAGAGGATGAACAAGGATGTGGAGTCTCCTTATGTGGCACTCTCTTCCAGTGATTCATCAGGGATGGTTTGGGAATTGGATGATGATGATAACATTTCTTATTTCATCAAAAAGAAGCTTCGTGTTTGGTGTAGGCAACCAAGAGGGCAGTGGGAACTAGGAACAATACAGTCAACTTCAGGAGAGGAAGCATCCATTTCACTCTCAAATGGAAATGTTATTAAAGTGGTCAGATCAGAGATTCTACCAGCGAATCCTGGTGTTTTAGAGGGTGTGGATGATCTTATTAAACTTGGTTATTTGAACGAGCCATCGGTTCTTCACAATCTGAAGTTGAGATATTCTCAAGGAATGATTTATAATAAAGCAGGGCCAATTTTAATTGCCCTCAATCCTTTCAAAGATCTTCAGACAAATGGAAATGATTATGTCTCAGCTTATAGGCAGAGAATTATTGATAGTCTTCATGTTTATGCTGTGGCAGATGTGGCTTATAACAAGATGATAAGAGATGAAGTAAATCAGTCCATTATCATAAGTGGTGAGAGTGGATCTGGGAAGACAGAAACAGCTAAAATTGCATTGCAACACTTAGCTGCTCTTGGTGGTGGTGGCAGTTGTGCTATAGAAAATGAATTTCTTCAGATAAATCGTATACTAGAAGCTTTTGGGAATGCAAAAACATCTAGGAATAACAACTCTAGCAGATTTGGAAAGTTGATTGAAGTTCATTTCAGCTCCATGGGTAAAATATGTGGGGCTAAAATTAAAACCTGTAAGCTTCAGTCTAGAGTTGTTCAACTGGCCAATGGTGAGAGATCATATCACATATTTTATCAACTTTGTGCTGGATCTTCTTCTGATCTTAAAGAGAGACTGAATCTTAGAGCAGTCTGTGAATATAAATATCTAGTTCAGAGTGACTGCACATCAATTGATGATGCCGATGATGCTAAAAACTTTCCTCAGCTGAAGAAAGCCCTGGATACTGTTCAAATTTGTAAAGAGGATCAAGAGATGATCTTTAAGATGCTCGCTGCAATACTATGGCTGGGAAATATATCATTCCAAGTAGACAGTGAAAATCACATTGAGGTTGTTGATGATGAAGCTGTAACCAGTACTGCCCAGCTGATGGGTTGCAGTTCCCAGGAATTAATGACAGCATTATGTAGCCATAAAATTCAATCTGACGAGGATACTATTGCCAAAAATCTGACATTGAGGCAGGCAATCGAAAGAAGAGATGCAATTGCAAAATTCATCTATGCAAGCTTGTTTGACTGGCTTGTAGAACAAGTTAACAAGTCACTTGAAGTGGGTAAACAATATACTGGGAAATCCATAAGTATCCTAGATATTTATGGGTTTCAGACTTTCCAGAAAAACAGCTTTGAACAGTTTTATATAAATTATGCCAATGAGAGGATTCAACAACATTTTAATCGGCATCTGTTTAAACTTGAGCAGGAGGATTATGAATTGGATGGCGTTGATTGGACTAAGGTAGATTTTGAGGATAATGAAGTGTGCTTGGATCTATTTGAGAAGAAACCTCACGGTCTACTCTCTTTATTGGATGAGGAGTCAAATTTAGCCAAGGCTTCTGATTTAACATTTGCCAACAAACTTAAGCACCACCTGAATGCTAATCCTTGCTTCAAAGGAGAAAAAGGCAGAGCTTTCCGTGTTCGTCACTATGCAGGGGAGGTTCTGTATGATACAAATGGCTTTCTAGAAAAGAACAGAGACATGTTGTCTTCTGATTCCATTCAATTCCTGTCATCATGTAATTGTGAACTGCTGCAGTTGTTCTCCAAAATGTTTAACCAGTCTCAAATGCAGAGTGTTGCAACAAAGTTCAAGGTTCAATTGTTCATGTTGATGCATCAGTTGGAGAGTACCACACCTCACTTTATTCGCTGTATAAAGCCAAATACTAAGCAGCTTCCTGGCATTTTTGATGAAGTCCTTGTCCTACAACAGCTCAGATGTTGTGAAGTTCTAGAAGTTGTTAGAGTTTCAAGGGCTGGATATCCTACTCGAATGGCCCATCAAGAGTTTTCCAGAAGGTATGGGTTTCTGCTTTCTGAGGCCAATGTATTGCAGGATCCATTGAGCATCTCGGTTGCTGTTTTGCAAAAATTTAATATCCCTTCTGAAATGTACCATGTTGGCTACACCAAATTGTATCTTCGAGCAGGGCAGATTGATTCACTGGAGAATAAGAGAAAGCAGGTTTTACAGGGAATACTTGGGATTCAAAAATGCTTCCGTGGTCATCGAGCTCGTGTTTATTTCTGTGAACTTAAGAATGGAGTGACAACATTGCAATCATTTATTCGTGGAGAAAATACAAGAAGGAAATATGGTGTTACAGTGAAGTCTTCAGTAACAATTTATTCTAGAATACTGGAGGAGATCCATGCAATCATACTATTACAATCTGTAATTCGTGGTTGGCTGGTTAGAAGGGGGGATGCTAGTCACATAAATAGGTCAAAGAGATATCCTGAAAATGCTAAACCTAGGTGGAAGTCCTTTATGAAGATAATACCGGAAGTAAAGCCGGACTTGTCCAAAGAGCCGGTTCAGAATCTGCTTTCAGCTTTAGCAGATCTCCAAAGGCGAGTTGACAAGGCTGATGCAATTGTGAAGCAAAAGGAAGACGAAAATACCGAATTGAGGGAACAGCTAAAACAATCTGAGAGGAAGAGGATCGAATATGAGACAAAAATGAAATCAATGGAGGAGGCTTGGCAAAAGCAGATGGCATCTTTGCAAATGAGTCTTGTTGCTGCTAGAAAGAGCCTTGCTCCCGAGAATGCTTCAGTTCAGCCTGTAAGACGTGATTTTGTGCTACCTCGTGGTTATGATTCTGAAGATGCTACATCCATGGGATCTCGAACACCTGGTGGGAGCACACCAATGCTTTCTGGTAGTCTATCTGCCTCTGATGCAGGGAGACAGGTCAATGGTACATTGACCACAGTTGGCAATCTGATGAAGGAATTCGAGCAGGAAAGACAGAACTTTGATGATGAAGTGAAAGCTTTGAACGATGTTAAACCGGAGCAGTCTGCCAATACAAATTCCTTTGAAGAGCTTCGGAAACTGAAACAGAGATTTGAGGGATGGAAGAATCAATACAAGGTTAGATTACGAGAGACTAAAACAAGGCTTTATAAATCAGAAACGGAAAAAAGTCGGCGAACATGGTGGGGGAAGTTAAGCTCAAAAGCATAA 3540 0.415 MVLSASPCSLARSSLEEMLDSLRRRDEEEEKKDSPPALPARPASRARLPPARRSLPNNFRVGGSQRVIAPENGVGTNGESDLKENDLGQKRRRNCFERKRMNKDVESPYVALSSSDSSGMVWELDDDDNISYFIKKKLRVWCRQPRGQWELGTIQSTSGEEASISLSNGNVIKVVRSEILPANPGVLEGVDDLIKLGYLNEPSVLHNLKLRYSQGMIYNKAGPILIALNPFKDLQTNGNDYVSAYRQRIIDSLHVYAVADVAYNKMIRDEVNQSIIISGESGSGKTETAKIALQHLAALGGGGSCAIENEFLQINRILEAFGNAKTSRNNNSSRFGKLIEVHFSSMGKICGAKIKTCKLQSRVVQLANGERSYHIFYQLCAGSSSDLKERLNLRAVCEYKYLVQSDCTSIDDADDAKNFPQLKKALDTVQICKEDQEMIFKMLAAILWLGNISFQVDSENHIEVVDDEAVTSTAQLMGCSSQELMTALCSHKIQSDEDTIAKNLTLRQAIERRDAIAKFIYASLFDWLVEQVNKSLEVGKQYTGKSISILDIYGFQTFQKNSFEQFYINYANERIQQHFNRHLFKLEQEDYELDGVDWTKVDFEDNEVCLDLFEKKPHGLLSLLDEESNLAKASDLTFANKLKHHLNANPCFKGEKGRAFRVRHYAGEVLYDTNGFLEKNRDMLSSDSIQFLSSCNCELLQLFSKMFNQSQMQSVATKFKVQLFMLMHQLESTTPHFIRCIKPNTKQLPGIFDEVLVLQQLRCCEVLEVVRVSRAGYPTRMAHQEFSRRYGFLLSEANVLQDPLSISVAVLQKFNIPSEMYHVGYTKLYLRAGQIDSLENKRKQVLQGILGIQKCFRGHRARVYFCELKNGVTTLQSFIRGENTRRKYGVTVKSSVTIYSRILEEIHAIILLQSVIRGWLVRRGDASHINRSKRYPENAKPRWKSFMKIIPEVKPDLSKEPVQNLLSALADLQRRVDKADAIVKQKEDENTELREQLKQSERKRIEYETKMKSMEEAWQKQMASLQMSLVAARKSLAPENASVQPVRRDFVLPRGYDSEDATSMGSRTPGGSTPMLSGSLSASDAGRQVNGTLTTVGNLMKEFEQERQNFDDEVKALNDVKPEQSANTNSFEELRKLKQRFEGWKNQYKVRLRETKTRLYKSETEKSRRTWWGKLSSKA 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01353 1179 Pfam IQ calmodulin-binding motif 849 865 IPR000048 GO:0005515
Gma12g01353 1179 Pfam IQ calmodulin-binding motif 907 923 IPR000048 GO:0005515
Gma12g01353 1179 Pfam IQ calmodulin-binding motif 872 888 IPR000048 GO:0005515
Gma12g01353 1179 Gene3D - 777 844 - -
Gma12g01353 1179 MobiDBLite consensus disorder prediction 1056 1086 - -
Gma12g01353 1179 MobiDBLite consensus disorder prediction 1061 1086 - -
Gma12g01353 1179 ProSiteProfiles IQ motif profile. 847 874 IPR000048 GO:0005515
Gma12g01353 1179 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 889 IPR027417 -
Gma12g01353 1179 ProSiteProfiles Myosin motor domain profile. 188 843 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma12g01353 1179 Gene3D Myosin VI head, motor domain, U50 subdomain 428 535 - -
Gma12g01353 1179 ProSiteProfiles IQ motif profile. 905 934 IPR000048 GO:0005515
Gma12g01353 1179 MobiDBLite consensus disorder prediction 1 95 - -
Gma12g01353 1179 Coils Coil 962 1017 - -
Gma12g01353 1179 Gene3D - 558 733 - -
Gma12g01353 1179 CDD MYSc_Myo8 202 831 IPR036022 -
Gma12g01353 1179 Gene3D Kinesin motor domain 188 776 IPR036961 -
Gma12g01353 1179 Pfam Myosin head (motor domain) 190 831 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma12g01353 1179 MobiDBLite consensus disorder prediction 17 36 - -
Gma12g01353 1179 PANTHER MYOSIN 120 1178 - -
Gma12g01353 1179 SMART MYSc_2a 182 844 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma12g01353 1179 Coils Coil 12 32 - -
Gma12g01353 1179 PRINTS Myosin heavy chain signature 599 627 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma12g01353 1179 PRINTS Myosin heavy chain signature 218 237 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma12g01353 1179 PRINTS Myosin heavy chain signature 316 343 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma12g01353 1179 PRINTS Myosin heavy chain signature 546 574 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma12g01353 1179 PRINTS Myosin heavy chain signature 272 297 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma12g01353 1179 Gene3D - 849 893 - -
Gma12g01353 1179 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 135 184 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gma12g01353 1179 ProSiteProfiles IQ motif profile. 868 897 IPR000048 GO:0005515
Gma12g01353 1179 Coils Coil 1100 1120 - -
Gma12g01353 1179 Gene3D - 371 427 - -
Gma12g01353 1179 PANTHER MYOSIN-2 ISOFORM X1 120 1178 - -
Gma12g01353 1179 SMART iq_5 904 926 IPR000048 GO:0005515
Gma12g01353 1179 SMART iq_5 844 866 IPR000048 GO:0005515
Gma12g01353 1179 SMART iq_5 867 889 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01353 Gma-Chr12 20908821 20926729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01353 1 1174 Myosins gene family AT5G54280 57.852 0.0 1380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01353 K10357 - gmx:100802074 2245.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01353 12 20908821 20926729 Gma12g01353 12 20908821 20926729 ECH