Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01346 ATGGCAATACCACCACCGTCCCCGCCACAATCAGAAAACCCTCGTGAGGTTACTTCAAAAAGGACAAGACAATCCACGAGGCTCAGAAGTTTGACGTCTAGATGCTTAGATGGCCCACGGCCAGTTGTGAACATGAATCCGGCTACAGGTAGAGGGTCAGGGCCTCATAAAGAGAAATTTCACAGTTATTTAGGGGTTGTCGCAAGGGAAAAAGTTCCTATTGTACACGCGAATTGGAATTTGTTCCCCGACGATCTAAAGAGCTTAATATGGAAAGATATTTTGGTGGTCGTAGGATCCGATAAGCCTCCATCAAAGTCTGTTGGAGAGCCAAACAGGTTAACATCTGTGGCCACAGATGACCCACTAGGAGAATTGGTTAAGAAGTCATATGTGGTTTACACAAAGCCAATGGAGTTGGCATGGGACGGGGCGAAATTTGGGTTACCTAATGCCTCAAATGTAATCTCCAAGGCAAGGACAATGCACCTCCACCTCCACCTCAATGGATTGAGGCTAAGGTTAGCGTTTGACATGTTCCTGCTTGGGTCGTTCAGTCCGCCGCAACCTTCTCATACATTGGTCCAAGAAATCATCGGAAAAGCTACTCAGGAATATACTCATGGAGTTGTGATTCGATTTCGATCCGTTGAGGCATTTGAGATATTTATAAATAGCAAAGAGTACAAAAATGGTGGACCTGGGATGATCACAACTATTATCCAGCATTTGAAGCAAGAGGCAGCAAACATGATGAAGAAGATTGGCCTTCTTGAAGCTGCAAAACGGAAGTTCTTGGGGGAAGGGTTGGGGGCTTGCTCCATTGAGGAATTGAAATGGATAGAACAACAGTTGGAGAAGAGTTTGAGTAATGTTAGAGCCAGAAAGGAAAAAGTCCTACTTGAtgaaaatgccaagctcactgaaaatggcaggctctctgaGAAGGTGAAGTTACTTCTATTTGGAATTAATTCTGTGTGGCCTATAGTTCATTTGGATAATATTTTAAAGCAGATAGAAGCAGTGCCAAATTATCAAGGGGACAATTACATGGGCAAACCAGTGAGGATAAATTGTCACAAGGCGATTCTGATGATGAAATGCTCAGCTCTGTTCTCAAGACCTTTGTCTACTAGCCCTAATCAGTTAGACGATGACAAAATAACAGGAGCTACCAATCATAAATCCGTGAATTTGGAGGGAAGCCTGTTGGTTCAGCACCTATTCAAGGACCACAGAAGATGTAGTTACATGATAGCCAATGCACTGGATAAGGATGGTAAATTCACTACTGCCCAAGTCTCTCAAAAACTTAAGCAGCTTGGTTTGTATCTTCCTCTGCCCAAGGATGGTAAATTCACTACTGCCCAAGGGGTGCTTCTCCTGAACTAA 1395 0.4244 MAIPPPSPPQSENPREVTSKRTRQSTRLRSLTSRCLDGPRPVVNMNPATGRGSGPHKEKFHSYLGVVAREKVPIVHANWNLFPDDLKSLIWKDILVVVGSDKPPSKSVGEPNRLTSVATDDPLGELVKKSYVVYTKPMELAWDGAKFGLPNASNVISKARTMHLHLHLNGLRLRLAFDMFLLGSFSPPQPSHTLVQEIIGKATQEYTHGVVIRFRSVEAFEIFINSKEYKNGGPGMITTIIQHLKQEAANMMKKIGLLEAAKRKFLGEGLGACSIEELKWIEQQLEKSLSNVRARKEKVLLDENAKLTENGRLSEKVKLLLFGINSVWPIVHLDNILKQIEAVPNYQGDNYMGKPVRINCHKAILMMKCSALFSRPLSTSPNQLDDDKITGATNHKSVNLEGSLLVQHLFKDHRRCSYMIANALDKDGKFTTAQVSQKLKQLGLYLPLPKDGKFTTAQGVLLLN 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01346 464 MobiDBLite consensus disorder prediction 1 56 - -
Gma12g01346 464 PANTHER SERUM RESPONSE FACTOR HOMOLOG 240 313 - -
Gma12g01346 464 Coils Coil 241 261 - -
Gma12g01346 464 Pfam K-box region 242 315 IPR002487 GO:0003700|GO:0005634|GO:0006355
Gma12g01346 464 ProSiteProfiles K-box domain profile. 241 343 IPR002487 GO:0003700|GO:0005634|GO:0006355
Gma12g01346 464 Coils Coil 462 464 - -
Gma12g01346 464 PANTHER MADS-BOX PROTEIN SOC1-LIKE ISOFORM X1 240 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01346 Gma-Chr12 20619122 20630704 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01346 241 309 MADS-box Gene Family AT2G45660 63.768 1.01e-21 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01346 - - gsj:114420194 295.434