Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01332 ATGGTGGACAACTTCAGAATGTTGTTTATTTGGTTCTTATTATTCTCGTACTTGAGAAACTCCACTTCTTTGGACAGTTTAGCTCCGAGTCAATCTATCCGAGATAGTGAGCGATTAGTTTCAAAAGAAGGAACATTTGAAGCAGGTTTCTTTAGCCCTGGAACTTCAACAAGACGATACCTGGGAATATGGTACAGGGATGTGTCTCCTTTAACAGTGGTGTGGGTGGCTAACCGAGAAAAACCAGTTTATAACAAATCAGGAGTTTTAAAACTCGAGGAAAGAGGGGTTCTTATGATTCTTAATAGCACCAACAGCACAATTTGGAGGTCCAACAACATATCAAGCACAGTAAAGAATCCAATTGCACAGCTCTTGGACTCAGGAAATCTTGTGGTGAGAAATGAACGGGATATAAACGAGGACAACTTTTTGTGGCAGAGTTTTGATTATCCGTGTGATACTTTTTTGCCAGGAATGAAGTTGGGATGGAACTTAGTAACTGGTCAAGACAGGTTTCTGTCATCTTGGAAAAGCGAAGATGACCCTGCTAAGGGAGATTATTCTTTGAAACTTGATCTTAGAGGATATCCAGAATTTTTTGGATACGAGGGGGATGCAATAAAATTTAGAGGAGGCTCGTGGAATGGAGAGGCTTTGGTGGGCTATCCAATTCATCAACTCGTACAACAACTTGTATATGAATTTGTGTTTAATAAAAAGGATGTGTATTATGAATATAAGATCCTTGATAGATCGATTATCTACATATTTACATTGACCCCATCAGGGTTCGGCCAACGTTTCCTTTGGACAAATCAAACGAGCAGTAAAAAAGTTCTCTCTGGTGGGGCAGATCCGTGTGAAAACTATGCTATATGTGGTGCAAATTCTATATGCAATATGAATGGTAACGCTCAGACATGTGATTGCATCAAAGGATATGTTCCAAAGTTCCCTGGACAATGGAATGTATCATATTGGTCCAATGGCTGTGTTCCAAGGAATAAATCTGATTGTAAAACCAGCAACACAGATGGCTTGTTGAGGTATACAGACATGAAAATTCCAGATACATCTTCATCATGGTTCAATAAGACCATGAATCTTGAGGAATGTCAGAAGTCTTGTCTGAAAAACTGTTCTTGTAAAGCATGTGCAAATTTGGATATTCGTAATGGAGGAAGTGGCTGTTTACTTTGGTTTGATGATCTGGTTGATATGAGACAATTCTCTAAAGGGGGACAAGACCTTTATTTCAGAGCCCCTGCATCAGAGCTAGTTAATAGCCATGGGAAGAACTTGAAAAAGTTGCTAGGAATCACAATTGGTGCGATTATGCTTGGATTAACTGTTTGTGTTTGCATGATATTGATACTCAAAAAGCAAGGGTTAGCAAGAATAATTGATAGGAATCATTTCAAACATAAGCTGAGAAAGGAAGACGATGATTTGTCAACGTTTGATTTCGCAATCATAGCGAGAGCCACTGGAAACTTTGCAAAGAGTAACAAACTGGGAGAAGGTGGCTTTGGACCTGTATATAAGGTGATATGGGAAACCTGTCACAGGTGTTTTTTCCTCAAAATGTTTCTAACAATTGTAGATGTTGCTTTGCAGGCAAGACTGTTGGATGGGCAAGAGTTTGCCGTTAAAAGGCTTTCAAATAAATCAGGACAAGGGTTGGAGGAGTTCAAAAATGAAGTTATGTTGATTGCCAAACTTCAACACCGTAATCTTGTCAAGCTCATTGGTTGCAGCATTGAAGGAAAAGAAAGAATGTTGATCTATGAGTACATGCCAAACAAAAGCTTGGATTACTTTATTTTTGATGAAACTAGAAGGACAATGGTAGATTGGCCTAAGCATTTCAACATTATCTGTGGCATTGCTCGAGGAATTCTTTATCTTCATCAAGACTCTAGATTGAGGATTGTTCATAGAGATCTGAAAACCAGCAACATTTTACTAGATGGTAATTTCGATCCTAAAATATCGGACTTTGGCTTAGCTAGAACATTCTGGGGAGATCAAGTTGAGGCAAACACAAATAGGCTGGCTGGAACATATGGTTACATGGCTCCTGAGTATGCTGCTCGTGGGCAGTTTTCAATGAAATCAGATGTCTTTAGTTATGGTGTGATAGTGTTAGAGATTGTAAGTGGCAAGAAGAACAGAGAATTTTCAGACCCAAAACACTACCTTAATCTTCTTGGACATACATGGAGATTGTGGGCTGAAGAGAGGGCATTGGAACTACTGGATGGAGTGTTAAAGGAAAGATTCACACCTTCTGAAGTCATACGATGTATACAAGTAGGCCTGTTATGCGTGCAACAAAGACCAGAGGATAGGCCAGACATGTCATCAGTTGTTCTAATGCTTAATGGCGAGAAATTATTGCCCAACCCAAAGGTTCCGGGTTTTTACACAGAAGGAGATGTTAAACCTGAATCAGATTTTTCACCCACAAATCGCTTCTCAACTAATCAAATTTCAATCACAATGTTAGAAGCAAGATAG 2523 0.3924 MVDNFRMLFIWFLLFSYLRNSTSLDSLAPSQSIRDSERLVSKEGTFEAGFFSPGTSTRRYLGIWYRDVSPLTVVWVANREKPVYNKSGVLKLEERGVLMILNSTNSTIWRSNNISSTVKNPIAQLLDSGNLVVRNERDINEDNFLWQSFDYPCDTFLPGMKLGWNLVTGQDRFLSSWKSEDDPAKGDYSLKLDLRGYPEFFGYEGDAIKFRGGSWNGEALVGYPIHQLVQQLVYEFVFNKKDVYYEYKILDRSIIYIFTLTPSGFGQRFLWTNQTSSKKVLSGGADPCENYAICGANSICNMNGNAQTCDCIKGYVPKFPGQWNVSYWSNGCVPRNKSDCKTSNTDGLLRYTDMKIPDTSSSWFNKTMNLEECQKSCLKNCSCKACANLDIRNGGSGCLLWFDDLVDMRQFSKGGQDLYFRAPASELVNSHGKNLKKLLGITIGAIMLGLTVCVCMILILKKQGLARIIDRNHFKHKLRKEDDDLSTFDFAIIARATGNFAKSNKLGEGGFGPVYKVIWETCHRCFFLKMFLTIVDVALQARLLDGQEFAVKRLSNKSGQGLEEFKNEVMLIAKLQHRNLVKLIGCSIEGKERMLIYEYMPNKSLDYFIFDETRRTMVDWPKHFNIICGIARGILYLHQDSRLRIVHRDLKTSNILLDGNFDPKISDFGLARTFWGDQVEANTNRLAGTYGYMAPEYAARGQFSMKSDVFSYGVIVLEIVSGKKNREFSDPKHYLNLLGHTWRLWAEERALELLDGVLKERFTPSEVIRCIQVGLLCVQQRPEDRPDMSSVVLMLNGEKLLPNPKVPGFYTEGDVKPESDFSPTNRFSTNQISITMLEAR 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01332 840 CDD B_lectin 30 152 IPR001480 -
Gma12g01332 840 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 19 838 - -
Gma12g01332 840 Gene3D Hepatocyte Growth Factor 339 421 - -
Gma12g01332 840 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 19 838 - -
Gma12g01332 840 SMART serkin_6 500 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01332 840 CDD STKc_IRAK 506 797 - -
Gma12g01332 840 Gene3D Phosphorylase Kinase; domain 1 464 599 - -
Gma12g01332 840 ProSiteProfiles PAN/Apple domain profile. 340 424 IPR003609 -
Gma12g01332 840 SMART ntp_6 343 422 IPR003609 -
Gma12g01332 840 ProSiteProfiles Bulb-type lectin domain profile. 24 146 IPR001480 -
Gma12g01332 840 Gene3D - 20 149 IPR036426 -
Gma12g01332 840 Pfam PAN-like domain 340 408 IPR003609 -
Gma12g01332 840 ProSiteProfiles Protein kinase domain profile. 500 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01332 840 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Gma12g01332 840 Pfam S-locus glycoprotein domain 210 319 IPR000858 GO:0048544
Gma12g01332 840 Pfam D-mannose binding lectin 72 178 IPR001480 -
Gma12g01332 840 Pfam Protein tyrosine and serine/threonine kinase 503 793 IPR001245 GO:0004672|GO:0006468
Gma12g01332 840 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 183 IPR036426 -
Gma12g01332 840 CDD PAN_AP_plant 337 421 - -
Gma12g01332 840 SMART blect_4 30 152 IPR001480 -
Gma12g01332 840 Gene3D Transferase(Phosphotransferase) domain 1 600 801 - -
Gma12g01332 840 PIRSF SRK 1 840 IPR024171 GO:0004674
Gma12g01332 840 SUPERFAMILY Protein kinase-like (PK-like) 484 805 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01332 Gma-Chr12 19843938 19847250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01332 440 810 Receptor kinase-like Gene Family AT4G23190 48.158 3.12e-117 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma12g01332 PK_Tyr_Ser-Thr 1.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01332 - - gmx:100790261 1638.62