Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01330 AACCTGCCCCAAGATACAACAGACACTTGTGCATACAACCTTTACCTCTAACTATGTTTTGAAGAGTTTGATTGCTTTGTGGTGTGAAAGCAACGGTATTGAGCTACCAAAGAGGCAAGGGAACTGTAGAACAAAGAAATGTGGTGGCAGCAGTCTTTCAGAGGATGCTGCTACTGCTCTAATAAAGTTACTTTGTGAAGGTACTCCTACAGGTAAGAAGGATGCTGCTACTGCTATCTTCAACCTATCTATTTATCAGGGAAATAAAGCAAGAGTTGTAAAAGCTGGTATAGTAGCCCAACCGATACAATTTTTTAAGGATGCTGGGGGTGGAATGGTAGATGAAGCACTAGCTATTATGGCAATCCTTGCAAGCCACCATAAAGGCAGGGTAGCGATCGGTCAGGCCAAGCCAATTCATATTCTTGTTGAGGTTATACGAACCGGCTCTCCACGCAATCGAGAGAATGTTGCTGCTGTCTTATGGTCACTATGCACCGGAGATCCACTGCAATTAAAACTAGCGAAAGAACATGGTGCAGAAGCAGCACTGCAGGAGTTGTCAGAAAATGGAACTGATAGAGCTAAGATAAAAGCTTGA 601 0.4343 TCPKIQQTLVHTTFTSNYVLKSLIALWCESNGIELPKRQGNCRTKKCGGSSLSEDAATALIKLLCEGTPTGKKDAATAIFNLSIYQGNKARVVKAGIVAQPIQFFKDAGGGMVDEALAIMAILASHHKGRVAIGQAKPIHILVEVIRTGSPRNRENVAAVLWSLCTGDPLQLKLAKEHGAEAALQELSENGTDRAKIKA 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01330 199 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 14 1 53 - -
Gma12g01330 199 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 14 55 199 - -
Gma12g01330 199 PANTHER U BOX DOMAIN-CONTAINING 1 53 - -
Gma12g01330 199 PANTHER U BOX DOMAIN-CONTAINING 55 199 - -
Gma12g01330 199 ProSiteProfiles U-box domain profile. 1 34 IPR003613 GO:0004842|GO:0016567
Gma12g01330 199 SUPERFAMILY ARM repeat 54 192 IPR016024 -
Gma12g01330 199 Gene3D - 19 199 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01330 Gma-Chr12 19710246 19710846 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01330 60 199 U-box Gene Family AT3G54850 66.429 8.33e-57 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01330 - - gmx:121173156 353.214