Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01328 ATGGATAAAGATGCTAATTCAGAAATCCAACTCCCTCCTGGATTTAGATTCCACCCTTTTGATGAGGAGCTAATTGTTCACTATCTGAGAAACAAAGTGACATCATCACCCCTTCCTGCTTCATTCATAGCAGAAATAGATCTTTACAACTATAATCCATGGGAGCTCCCAAGCAAAGCTTTGTTTGGGGAGGATGAGTGGTATTTCTTTACTCCAAGAGATATGAAGTATCCCAAGGGAGTGAGGCCTAATAGAGCAGCTGCTTCTAGTTATTGGAAGGCTACTGGGACTAACAAACCCATTTTCACTTCCTGTGGGATGAAGAGCATTGCTGTCAACAAGGCACTCGTGTTCTACAAGGGTCGTCCACCAAAGGGATCGAAAACCGACTGGATCATGCATGAGTATAGATTGCATGATTCCATGATCTCCAATTCAAAGCAAGGAGGGTCCATGAGAGTAGGCCAATTTCATGAGTTCAATTTTTCAATTTGGTGGTTTTTAATGACCAATAGAGTAAATTATTGA 528 0.4148 MDKDANSEIQLPPGFRFHPFDEELIVHYLRNKVTSSPLPASFIAEIDLYNYNPWELPSKALFGEDEWYFFTPRDMKYPKGVRPNRAAASSYWKATGTNKPIFTSCGMKSIAVNKALVFYKGRPPKGSKTDWIMHEYRLHDSMISNSKQGGSMRVGQFHEFNFSIWWFLMTNRVNY 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01328 175 Pfam No apical meristem (NAM) protein 12 138 IPR003441 GO:0003677|GO:0006355
Gma12g01328 175 Gene3D NAC domain 21 160 IPR036093 GO:0003677|GO:0006355
Gma12g01328 175 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 2 154 - -
Gma12g01328 175 ProSiteProfiles NAC domain profile. 11 160 IPR003441 GO:0003677|GO:0006355
Gma12g01328 175 PANTHER NAC TRANSCRIPTION FACTOR 56 2 154 - -
Gma12g01328 175 SUPERFAMILY NAC domain 8 143 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01328 Gma-Chr12 19677277 19677954 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01328 4 156 NAC Transcription Factor Family AT1G69490 64.052 3.55e-72 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma12g01328 NAM 1.1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01328 - - gmx:100788660 326.25