Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01326 ATGGAGAGTGACGACGGAGGAAAGAGAGGAGCACCGCTGGCATCAATGGCCGTGTTGTGGAAGCCTTGTCAAAGGCGAAGATTGCGTCAAAAAGCAAAGTCATGGCATTCATTTGATCTTCAATGTCATTCAAAACGAGCACTGTTTAGGTTAAGAAATGCATTATGCATGGCATGTGCAGTAAAAGTGATCACTGGTGACAACGTTAATCTTAAAATCTATTGTTCAGACACACTTTTTTTGGCCGATATTGGTCTTGCAATGGGTATCCAAGGTATAGAAGTTGCTAAAGAGAGCTCTGATATCATTATTTTGGATGACAATTTTGCTTCAGTTGTGAAGGTTAATAGAGTCATCCTCAGGACCCTGCAAACTAGACTTGACAAGTCTAAGGGTCAATGGAAAGAATAA 411 0.4088 MESDDGGKRGAPLASMAVLWKPCQRRRLRQKAKSWHSFDLQCHSKRALFRLRNALCMACAVKVITGDNVNLKIYCSDTLFLADIGLAMGIQGIEVAKESSDIIILDDNFASVVKVNRVILRTLQTRLDKSKGQWKE 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01326 136 Gene3D - 60 114 IPR023214 -
Gma12g01326 136 PANTHER CALCIUM-TRANSPORTING ATPASE 51 117 - -
Gma12g01326 136 SUPERFAMILY HAD-like 82 123 IPR036412 -
Gma12g01326 136 PANTHER CATION TRANSPORTING ATPASE 51 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01326 Gma-Chr12 19614349 19615406 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01326 61 117 Primary Pumps ATPases AT5G57110 68.421 5.71e-15 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01326 K01537 - vvi:100253521 69.707