Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01325 ATGGTGCACATCTTCAGAATGTTATTTATATGGTTCTTACTCTTATCATACTTGAGGAACTCCACTTCATCGGACAATTTAGCAGTTAGTCAATATATCAGAGATGGGGAGACATTAGTTTCAGAAGAAGGAACATTTGAAGTGGGTTTCTTTAGCCCTGGAGCTTCAACAGGACGATACTTGGGGATATGGTACAGAAATCTATCTCCATTAACAGTGGTCTGGGTGGCTAACCGAGAAAATGCACTTCAAAATAAGTCAGGAGTTTTAAAGCTTGATGAAAAGGGTGTTCTTGTGATTCTCAATGGCACCAACAATACAATTTGGTGGTCAAACAACACATCAAGCAAAGCAGCAAAGAATCCTATTGCACAGATCTTAGACTCTGGAAATATTGTGGTGAGAAATGAACGGGATATAAACGAGGACAACTTTTTTTGGCAGAGTTTTGATTATCCGTGTGACACATTTTTGCCAGGAATGAAAATTGGATGGAAAACTGGTCTAGATAGAACTCTATCATCTTGGAAAAATGAAGATGATCCTGCTAAGGGAGAATATTCGATGAAACTTGATCTTAGAGGATATCCACAATTTTTTGGATACAAGGGAGATGTAATAACATTTAGAGGAGGCTCATGGAACGGACAGGCTTTGGTGGGTTATCCAATTCGTCCACCCACACAACAATATGTATATGATTTTGTGTTTAATGAAAAGGAAGTGTATGTTGAGTATAAGACCCCTGATAGATCGATTTTCATCATAATTACATTGACCCCTTCAGGGTCTGGGTTTGGAAACGTTCTCCTATGGACAAAGCAAACACGGAATATAGAAGTCCTGAGGCTTGGTGAGTCAGATCAGTGTGAAAATTATGCTATATGTGGTGCAAATTCTATTTGTAATATGGATGGTAACTCTCAGACATGTGATTGCATCAAAGGATATGTTCCAAAGTTCCCTGAACAAAGGAATGTATCATATTTGCATAATGGCTGTGTTCCTAGGAATAAATTTGATTGTAAAAGCAGCAACACTAATGGCTTCTTGAGATACACGGACTTGAAATTGCCAGATACATCTTCATCATGGTTAAATAAGACCATGAACCTTGACGAATGTCAGAAGTCTTGTCTGAAAAATTGTTCTTGTAAAGCATATGCAAATGCGGATATTCGTAATGGAGGAAGTGGCTGTTTACTTTGGTTTGATGATCTGATTGACATGAGAAAATTCTCTTTAGGTGGACAAGACATTTATTTCAGAGTCCCTGCTTCAGAGCTAGATCATGTTGCATTCAATGGCCATGGAAAAAACATGAAAAAGATGTTAGGAATCACAGTTGGTACGATTATTCTTGGATTAACTGCATGTGCTTGCATAATAATGATACTCAAAATGCAAGGAAGAATAATTTATAGGAAGCATTTCAAACATAAACTGAGAAAGGAAGGCATTGATTTGTCAACATTTGATTTTCTAATCATAGCAAGAGCCACTGAAAACTTCGCAGAGAGTAACAAATTGGGAGAAGGTGGCTTTGGACCTGTGTACAAGGTGATATGGAAAACCAACAAAAGATTTTTGTTTTGCTTACTCAAAATATTTCTAAAAGTTGTAGATGTTGGCTTGCAGGGAAGACTGAAGAATGGGCAAGAGTTTGCTGTGAAAAGGCTTTCAAAGAAGTCGGGTCAAGGGTTGGAGGAGTTCAAAAATGAAGTTGTGTTGATTGCCAAACTTCAACACCGTAATCTTGTCAAGCTCATAGGTTGCTGCATTGAAGGAAATGAAAGAATGTTGATCTATGAATACATGCCAAATAAAAGCTTAGACAACTTTATTTTTCATGAAACTCAAAGGAATTTGGTAGATTGGCCTAAGCGATTCAACATTATTTGTGGCATTGCTCGAGGACTTCTTTATCTTCATCAAGACTCAAGATTGAGGATTGTACATAGAGATTTGAAAACCAGCAATATTTTACTGGATGCAAATTTAGATCCTAAAATATCAGATTTTGGCTTAGCTCGAACATTATGGGGAGATCAAGTCGAGGCAAACACGAATAGGGTGGCTGGAACATATGGTTACATGCCTCCTGAGTATGCTGCTCGTGGGCATTTCTCAATGAAATCCGATGTCTTTAGTTATGGGGTGATACTGTTAGAGATTGTAAGTGGCCAAAGGAACAGAGAATTTTCAGACCCAAAACACAACCTTAATCTTCTTGGATATGCATGGAGATTGTGGACTGAAGAGAGGGCATTGGAACTACTGGATGGAGTGTTAAGGGAAAGATTCACACCTTCTGAAGTCATACGATGCATACAAGTGGGTCTGTTATGCGTGCAACAAAGACCAAAAGATAGGCCAGACATGTCATCGGTGGTTCTAATGCTTAATGGCGAGAAATTGTTGCCCAACCCAAAGGTTCCTGGTTTTTACACAGAAGGAGATGTGACACCTGAATCAGATATTAAACTTAAGAATTACTTCTCAAGTAATCAAATTTCAATCACAATGTTAGAAGCAAGATAG 2541 0.3817 MVHIFRMLFIWFLLLSYLRNSTSSDNLAVSQYIRDGETLVSEEGTFEVGFFSPGASTGRYLGIWYRNLSPLTVVWVANRENALQNKSGVLKLDEKGVLVILNGTNNTIWWSNNTSSKAAKNPIAQILDSGNIVVRNERDINEDNFFWQSFDYPCDTFLPGMKIGWKTGLDRTLSSWKNEDDPAKGEYSMKLDLRGYPQFFGYKGDVITFRGGSWNGQALVGYPIRPPTQQYVYDFVFNEKEVYVEYKTPDRSIFIIITLTPSGSGFGNVLLWTKQTRNIEVLRLGESDQCENYAICGANSICNMDGNSQTCDCIKGYVPKFPEQRNVSYLHNGCVPRNKFDCKSSNTNGFLRYTDLKLPDTSSSWLNKTMNLDECQKSCLKNCSCKAYANADIRNGGSGCLLWFDDLIDMRKFSLGGQDIYFRVPASELDHVAFNGHGKNMKKMLGITVGTIILGLTACACIIMILKMQGRIIYRKHFKHKLRKEGIDLSTFDFLIIARATENFAESNKLGEGGFGPVYKVIWKTNKRFLFCLLKIFLKVVDVGLQGRLKNGQEFAVKRLSKKSGQGLEEFKNEVVLIAKLQHRNLVKLIGCCIEGNERMLIYEYMPNKSLDNFIFHETQRNLVDWPKRFNIICGIARGLLYLHQDSRLRIVHRDLKTSNILLDANLDPKISDFGLARTLWGDQVEANTNRVAGTYGYMPPEYAARGHFSMKSDVFSYGVILLEIVSGQRNREFSDPKHNLNLLGYAWRLWTEERALELLDGVLRERFTPSEVIRCIQVGLLCVQQRPKDRPDMSSVVLMLNGEKLLPNPKVPGFYTEGDVTPESDIKLKNYFSSNQISITMLEAR 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01325 846 CDD STKc_IRAK 510 803 - -
Gma12g01325 846 Gene3D Transferase(Phosphotransferase) domain 1 607 807 - -
Gma12g01325 846 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 20 844 - -
Gma12g01325 846 Gene3D Hepatocyte Growth Factor 341 421 - -
Gma12g01325 846 SUPERFAMILY Protein kinase-like (PK-like) 490 809 IPR011009 -
Gma12g01325 846 ProSiteProfiles EGF-like domain profile. 286 323 IPR000742 -
Gma12g01325 846 Pfam D-mannose binding lectin 72 177 IPR001480 -
Gma12g01325 846 ProSiteProfiles Bulb-type lectin domain profile. 24 147 IPR001480 -
Gma12g01325 846 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 20 844 - -
Gma12g01325 846 Gene3D - 19 150 IPR036426 -
Gma12g01325 846 ProSiteProfiles PAN/Apple domain profile. 342 426 IPR003609 -
Gma12g01325 846 Pfam PAN-like domain 342 410 IPR003609 -
Gma12g01325 846 CDD B_lectin 30 153 IPR001480 -
Gma12g01325 846 ProSiteProfiles Protein kinase domain profile. 504 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01325 846 SMART blect_4 30 153 IPR001480 -
Gma12g01325 846 CDD PAN_AP_plant 341 425 - -
Gma12g01325 846 Pfam S-locus glycoprotein domain 209 321 IPR000858 GO:0048544
Gma12g01325 846 SMART serkin_6 504 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01325 846 PIRSF SRK 1 846 IPR024171 GO:0004674
Gma12g01325 846 Gene3D Phosphorylase Kinase; domain 1 489 540 - -
Gma12g01325 846 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 182 IPR036426 -
Gma12g01325 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 651 663 IPR008271 GO:0004672|GO:0006468
Gma12g01325 846 Pfam Protein tyrosine and serine/threonine kinase 507 799 IPR001245 GO:0004672|GO:0006468
Gma12g01325 846 SMART ntp_6 345 424 IPR003609 -
Gma12g01325 846 Gene3D Phosphorylase Kinase; domain 1 542 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01325 Gma-Chr12 19551974 19598927 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01325 446 816 Receptor kinase-like Gene Family AT4G23190 47.644 1.75e-116 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma12g01325 PK_Tyr_Ser-Thr 2.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01325 - - gmx:100786515 1629.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01325 12 19551974 19598927 Gma12g01325 12 19551974 19598927 ECH