Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01324 ATGTTATTTATTTGGTTCTTCTTATTTTCCTACTTCTCAGGAACTTGCACTTCACTACACAGTTTAGCAGTGAATCAATCCATCCGAGATGGTGAGAATGAGACTTTGGTTTCAGCGGGTGGAATTATTGAAGTGGGTTTCTTTAGCCCAGGAAAATCAACAAGGCGATACTTGGGTATATGGTTCAAAAATGTTAACCCTTTAACAGTGGTGTGGGTGGCTAACCGAAATGCACCACTTGAGAAGAACTCAGGAGTTCTGAAACTCGACGAAAAGGGGATTCTTGTCATTCTGAATCACAAAAACAGCACCATTTGGTCATCCAACATATCAAGCAAAGCCGGGAATAACCCAATTGCTCATCCATTGGATTCTGGAAATTTTGTGGTGAAAAATGGACAGCAACCTGGCAAGGATGCCATATTGTGGCAGAGTTTTGATTATCCGGGTGATACACATACGCCAGGAATCAAGTTTGGGTGGAACTTTCAGATTGGTCTAGAAAGATCTCTATCATCTTGGAAAAGTGTTGACGATCCTGCAGAGGGAGAATATGTTGCAAAAATGGATCTTCGAGGATATCCACAAGTAATTGTGTTCAAGGGATCTGAGATAAAGGTCAGAGTGGGGCCATGGAATGGTCTGTCTTTGGTTGGATATCCGGTTGAAATTCCTTACTGTTCACAAAAATTTGTATTGAATGAAAAAGAGGTGTATTATGAGTACAACCTTCTTGATAGTTTGGATTTCAGCTTATTTAAACTTTCTCCTTCAGGCAGGTCACAGAGAATGTATTGGAGAACTCAAACAAACACGAGGCAAGTCCTCACAGTTGAGGAGAGAGATCAATGCGAAAATTATGGCTTTTGTGGAGAAAATTCTATATGCAATTATGATGGTAGCCGTGCAACTTGTGAATGCCTGAGAGGTTACGTTCCCAAGTCACCAGATCAGTGGAATATGCCAATTTTTCAAAGCGGTTGTGTTCCAGGGAATAAATCAGACTGTAAAAACAGTTATTCAGATGGATTCTTGAAGTATGCACGCATGAAATTGCCAGACACGTCTTCATCATGGTTTAGTAAGACCATGAACCTTGATGAATGTCAGAAGTCATGTCTTAAAAACTGTTCTTGTACAGCATATGCAAATTTAGATATCCGTAATGGAGGGAGTGGCTGTCTACTTTGGTTTAATAATATAGTTGACATGAGGTGTTTCTCGAAATCAGGGCAAGACGTTTATATCAGAGTCCCTGCTTCAGAATTAGATCATGGTGGCCCTGGAAACATCAAGAAAAAGATTCTTGGAATCGCTGTTGGTGTGACTATTTTTGGATTAATCATCACATGTGTCTGCATACTGATAAGCAAAAATCCGATAGCACGAAGATTATATCGTCATTTCCGACAATTTCAATGGAGGCAAGAATATCTTATCTTGAGGAAGGAAGACATGGATTTGTCAACATTTGAGTTGTCAACCATTGCTGAAGCCACTAATAATTTTTCTAGCAGAAATAAACTGGGGGAAGGTGGATTTGGGCCAGTGTACAAGGGTACACTAATAGATGGGCAAGACGTAGCCATAAAACGACACTCACAGATGTCTGATCAAGGACTGGGGGAGTTTAAGAATGAAGTTGTGCTAATTGCAAAACTTCAGCACCGTAATCTTGTGAAACTTCTAGGTTGCTGCGTTCAAGGAGGGGAAAAATTGTTGATCTATGAATACATGTCCAACAAGAGCTTAGACTACTTCATCTTTGATGAAGCTAGAAGTAAGCTCTTAGCCTGGAATCAACGTTTTCACATTATTGGTGGCATCGCACGGGGGCTTCTCTATCTTCACCAAGACTCTAGACTAAGAATTATTCACAGAGATTTGAAAACCAGCAATATCCTACTCGATGCGGATATGAATCCTAAAATCTCAGACTTTGGCTTGGCTCAGAGTTTTGGCTGTGATCAAATTCAAGCCAAAACCAGAAAAGTGGTTGGAACATATGGTTACATGCCTCCAGAGTATGCTGTGCATGGTCATTACTCTGTGAAATCAGATGTCTTTGGTTTTGGCGTGATTGTACTAGAGATAGTTAGTGGAAGCAAGAACAGGGGATTTTCTGACCCGAAACACTCTCTTAATCTACTTGGACATGCATGGAGACTTTGGACTGAAGACAGGCCATTGGAACTGATAGATATAAACTTACATGAAAGATGCATTCCTTTTGAAGTCTTAAGATGCATACATCTGGGTTTGTTGTGTGTACAACAAAAACCAGGAGATAGGCCGGATATGTCTTCTGTCATTCCTATGCTGAATGGTGAGAAATTATTGCCTCAGCCAAAGGCTCCTGGATTTTATACAGGAAAGTGTACTCCTGAATCAGTATCTTCATCTAAAACTTGCAAATTTTTATCACAAAATGAGATATCCCTGACAATTTTCGAGGCAAGATAG 2463 0.4019 MLFIWFFLFSYFSGTCTSLHSLAVNQSIRDGENETLVSAGGIIEVGFFSPGKSTRRYLGIWFKNVNPLTVVWVANRNAPLEKNSGVLKLDEKGILVILNHKNSTIWSSNISSKAGNNPIAHPLDSGNFVVKNGQQPGKDAILWQSFDYPGDTHTPGIKFGWNFQIGLERSLSSWKSVDDPAEGEYVAKMDLRGYPQVIVFKGSEIKVRVGPWNGLSLVGYPVEIPYCSQKFVLNEKEVYYEYNLLDSLDFSLFKLSPSGRSQRMYWRTQTNTRQVLTVEERDQCENYGFCGENSICNYDGSRATCECLRGYVPKSPDQWNMPIFQSGCVPGNKSDCKNSYSDGFLKYARMKLPDTSSSWFSKTMNLDECQKSCLKNCSCTAYANLDIRNGGSGCLLWFNNIVDMRCFSKSGQDVYIRVPASELDHGGPGNIKKKILGIAVGVTIFGLIITCVCILISKNPIARRLYRHFRQFQWRQEYLILRKEDMDLSTFELSTIAEATNNFSSRNKLGEGGFGPVYKGTLIDGQDVAIKRHSQMSDQGLGEFKNEVVLIAKLQHRNLVKLLGCCVQGGEKLLIYEYMSNKSLDYFIFDEARSKLLAWNQRFHIIGGIARGLLYLHQDSRLRIIHRDLKTSNILLDADMNPKISDFGLAQSFGCDQIQAKTRKVVGTYGYMPPEYAVHGHYSVKSDVFGFGVIVLEIVSGSKNRGFSDPKHSLNLLGHAWRLWTEDRPLELIDINLHERCIPFEVLRCIHLGLLCVQQKPGDRPDMSSVIPMLNGEKLLPQPKAPGFYTGKCTPESVSSSKTCKFLSQNEISLTIFEAR 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01324 820 SUPERFAMILY Protein kinase-like (PK-like) 486 774 IPR011009 -
Gma12g01324 820 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 12 818 - -
Gma12g01324 820 Gene3D Phosphorylase Kinase; domain 1 467 578 - -
Gma12g01324 820 Pfam PAN-like domain 336 404 IPR003609 -
Gma12g01324 820 ProSiteProfiles Protein kinase domain profile. 503 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01324 820 Gene3D Transferase(Phosphotransferase) domain 1 579 781 - -
Gma12g01324 820 SMART ntp_6 339 418 IPR003609 -
Gma12g01324 820 CDD PAN_AP_plant 333 419 - -
Gma12g01324 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Gma12g01324 820 Pfam Protein tyrosine and serine/threonine kinase 506 770 IPR001245 GO:0004672|GO:0006468
Gma12g01324 820 Gene3D Hepatocyte Growth Factor 336 416 - -
Gma12g01324 820 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 818 - -
Gma12g01324 820 Pfam D-mannose binding lectin 69 175 IPR001480 -
Gma12g01324 820 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 180 IPR036426 -
Gma12g01324 820 ProSiteProfiles PAN/Apple domain profile. 336 419 IPR003609 -
Gma12g01324 820 Gene3D - 17 146 IPR036426 -
Gma12g01324 820 ProSiteProfiles Bulb-type lectin domain profile. 21 143 IPR001480 -
Gma12g01324 820 Pfam S-locus glycoprotein domain 208 315 IPR000858 GO:0048544
Gma12g01324 820 CDD STKc_IRAK 509 776 - -
Gma12g01324 820 CDD B_lectin 31 149 IPR001480 -
Gma12g01324 820 ProSiteProfiles EGF-like domain profile. 280 317 IPR000742 -
Gma12g01324 820 SMART blect_4 27 149 IPR001480 -
Gma12g01324 820 SMART serkin_6 503 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01324 820 PIRSF SRK 1 820 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01324 Gma-Chr12 19493666 19497451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01324 424 789 Receptor kinase-like Gene Family AT4G23190 52.660 8.72e-125 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma12g01324 PK_Tyr_Ser-Thr 1.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01324 - - gmx:100786000 1692.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01324 12 19493666 19497451 Gma12g01324 12 19493666 19497451 ECH