Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01314 ATGAAGCTTGGATGGAACTTGGAGACTGGTCTAGAAAGAACTTTATCATCTTGGAAAAGTGTTGATGATCCTACTGAGGGAGAATATATTGTAAAAATGGGCCTCAGAGGATATCCTCAAATTATGAATTTCAAGGGACCTAACTTAGAATCGAGAGTGGGGTCATGGAATGGCTTGTCTGTAGTTGGATATCCAGGTCCAGTTCTTGCAACACCACAAAAATTTGAGATCAATGAAAAGGAAGTGTATTATGAGTTTGAGGTTCTTGCTAGATCGGTCTTCATCATATTGGCACTGTACACAAACTTGAAATTGCCAGACACCTCTTTATCAGGGTATAGTAAGACCATGAACCTTGAGAACTGTCAGAAGTCATGTCTTAATAACTGTTCTTGTACAGCATACACAAATTTAGATATCTGTGATGGAGGAAGTGGTTGTCTACTTTGGTTTAATACTTTAGTTGACATGAGCAAATTCTCTCAATGGGGACAAGACCTGTATATCAGAGTCCCTGCTTCAAAATTAGATAATGTTGACCATGGAAACATCAAGAAAAAGATAGGAGGAATCACTACTGCTGCAACTATTTTTGGGTTAATCATCACTTCCATATGCATATTGATAATTAAAAATTCAGCTGAAATAAAAAGGAACTCACTAGATTGGCAAAAGTGTTTCAACATTGTTAGTGGTATTGCTCGAGGACTTCTATATCTTCATCAAGACTCTAGGCTAAGGATTATTCATAGAGATCTAAAAACTAGCAACATTTTACTAGATGCAAATTTGGATCCCAAAATATTAGACCTTGGCTTGACTAGATCGATTTTGGGAGATCAAGTTGAGGCAAATACAAATAGGGTGGCTGGAACATATCATGGTGTGATAGTACAGGAGATTGTAACTGGGAAGAAAAACAAGGAATTTTCAGATTCAGAACACTACAGTTATCTTCTTAGACAT 966 0.3696 MKLGWNLETGLERTLSSWKSVDDPTEGEYIVKMGLRGYPQIMNFKGPNLESRVGSWNGLSVVGYPGPVLATPQKFEINEKEVYYEFEVLARSVFIILALYTNLKLPDTSLSGYSKTMNLENCQKSCLNNCSCTAYTNLDICDGGSGCLLWFNTLVDMSKFSQWGQDLYIRVPASKLDNVDHGNIKKKIGGITTAATIFGLIITSICILIIKNSAEIKRNSLDWQKCFNIVSGIARGLLYLHQDSRLRIIHRDLKTSNILLDANLDPKILDLGLTRSILGDQVEANTNRVAGTYHGVIVQEIVTGKKNKEFSDSEHYSYLLRH 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01314 322 Gene3D Hepatocyte Growth Factor 97 168 - -
Gma12g01314 322 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 215 322 - -
Gma12g01314 322 ProSiteProfiles PAN/Apple domain profile. 90 172 IPR003609 -
Gma12g01314 322 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 99 - -
Gma12g01314 322 Pfam Protein kinase domain 214 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01314 322 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 215 322 - -
Gma12g01314 322 Gene3D Transferase(Phosphotransferase) domain 1 176 319 - -
Gma12g01314 322 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 99 - -
Gma12g01314 322 SUPERFAMILY Protein kinase-like (PK-like) 216 307 IPR011009 -
Gma12g01314 322 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 99 213 - -
Gma12g01314 322 Pfam PAN-like domain 101 157 IPR003609 -
Gma12g01314 322 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 99 213 - -
Gma12g01314 322 CDD PAN_AP_plant 102 172 - -
Gma12g01314 322 SMART ntp_6 97 171 IPR003609 -
Gma12g01314 322 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Gma12g01314 322 ProSiteProfiles Protein kinase domain profile. 83 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01314 Gma-Chr12 19194477 19196636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01314 217 310 Receptor kinase-like Gene Family AT4G11530 51.304 5.19e-30 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma12g01314 Pkinase 5.2e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01314 - - gmx:102667134 175.252