Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01311 ATGTTACTTATTTGGTTCTTTTTATTCTCCTACATGACTAGAACTTCCACTTCAGTAGACCATTTAGCAGCGAGTCGATCAATCCGAGATAGTCAGATTTTGGTTTCAGCAGGTAATATTACGGCACTGGGTTTCTTCAGTCCCGGAAACTCAACAAGACGATACTTGGGTATATGGTTTAGAAAAGTACACCCTTTTACAGTGGTGTGGGTGGCTAACCGAAATACACCTCTTGAGAATGAATCAGGAGTCCTAAAACTCAACAAAAGAGGGATTCTTGAGCTTCTCAATGGCAAAAACAGCACCATTTGGTCATCATCAAGCAACAAATCAAGCAAAGCAGCGAAAAAACCAATTGCTCAACTCCGGGATTCGGGAAATTTGGTAGTGATAAATGGACCCAAGCGCAACACTAAGAAGCACAAAACCAATAACGGTGACATcttgtggcagagttttgattatccgggtgatacattgatgccaggaatgaaacttggatggaccttagagaatggtctagaaaggtctctgtcatcttggaaaaattggagtgatcctgctgaggggGAATATACTCTAAAAGTTGACCGTAGAGGATATCCTCAAATAATTTTATTCAGGGGACCAGATATTAAAAGGAGACTAGGTTCATGGAATGGCTTGCCTATAGTTGGATATCCAACTTCAACTCATCTAGTGTCGCAAAAATTTGTATTCCACGAAAAGGAGGTGTATTATGAGTACAAGGTTAAGGAGAAGGTTAATAGATCGGTCTTCAACTTATATAATCTGAACTCTTTTGGCACTGTGCGTGATTTGTTTTGGTCAACTCAAAACAGAAACCGGCGTGGATTCCAAATTTTGGAACAAAACCAATGCGAAGATTACGCCTTTTGCGGCGTAAATTCTATATGCAACTATATTGGTAAGAAAGCTACCTGTAAATGCGTGAAAGGATATTCTCCCAAGTCCCCTTCATGGAATTCGTCAACTTGGTCTCGCGGTTGTGTTCCTCCAATTCCAATGAATAAATCTAATTGCAAAAACAGTTATACAGAGGAATTCTGGAAGAACCAGCACATGAAATTTCCAGACACCTCTTCATCATTGTTTATTGAGACCATGGACTATACAGCTtgcaaaataaggtgtagggataactgttcttgtgtagcatatgcaaatataagtactggtggtggaactggctgtcttctctggtttaatgagctggttgacttgagctctaatgggggacaagacctttataCCAAAATCCCTGCTCCAGTACCCCCAAACAATAATACAATTGTCCATCCTGCTTCAGATCCAGCTGACCATAGAAACCTCAAGATAAAGACAGTAGCAATCACTGTTGGTGTGACTACTTTTGGATTAATAATCATATATGTGTGGATATGGATAATTAAAAATCCAGGGGCTGCAAGAAAATTTTACAAGCAGAATTTCAGAAAAGTAAAGAGAATGAAAGAGATTGATTTACCAACTTTCGATTTGTCAGTCTtagctaatgcgactgaaaacttttcaagcaaacacaagcttggagaaggtggctttggaccagtatacaagggaacattgatagatgggaaagtgatagctgtgaaaaggctttcaaagaagtccaaacaagggctggatgagttaaaaaatgaggtggcactgattgccaaacttcagcaccgtaatcttgtaaagcttcttggctgctgcattgaaggagaagaaaaaatgttaatttatgaatacatgcccaacctcagcttggactgctttctttttgATGAAACCAAAAAGaaattgctagattggcctaagcgtttcaacattattagcggtattactcgaggacttgtttatcttcatcaagactctaggctgagaattattcatagagatctaaaaactagcaatattttactggacgacaatttggatcccaaaatatcagactttggcttggctcgatcgtttttggaagatcaagttgaggcaaacacaaatagggtggctggaacatgtggctacatgcctcctgagtatgctgcgggtgggcgattctcagtgaaatcagatgtctttagctatggagtgattgtactagagattgtaagcgggaagagaaacacagagtttgcaaattctgaaaactacaataatattcttggacatGCATGGACATTATGGACTGAAGATAGGGCACTGGAACTACTGGATGATGTGGTAGGAGAACAATGTAAGCCCTATGAAGTCATACGATGCATACAGGTAGGCCTATTATGTGTGCAACAAAGACCACAAGATAGGCCACACATGTCATCAGTTCTTTCAATGTTGAGTGGTGATAAATTGTTGCCAAAGCCAATGGCTCCTGGCTTTTACTCCGGAACAAATGTTACATCTGAAGCAACTTCTTCGTCGGCAAATCACAAACTGTGGTCGGTCAATGAAGCTTCTATCACAGAGTTAGATGCAAGATAG 2508 0.2524 MLLIWFFLFSYMTRTSTSVDHLAASRSIRDSQILVSAGNITALGFFSPGNSTRRYLGIWFRKVHPFTVVWVANRNTPLENESGVLKLNKRGILELLNGKNSTIWSSSSNKSSKAAKKPIAQLRDSGNLVVINGPKRNTKKHKTNNGDILWQSFDYPGDTLMPGMKLGWTLENGLERSLSSWKNWSDPAEGEYTLKVDRRGYPQIILFRGPDIKRRLGSWNGLPIVGYPTSTHLVSQKFVFHEKEVYYEYKVKEKVNRSVFNLYNLNSFGTVRDLFWSTQNRNRRGFQILEQNQCEDYAFCGVNSICNYIGKKATCKCVKGYSPKSPSWNSSTWSRGCVPPIPMNKSNCKNSYTEEFWKNQHMKFPDTSSSLFIETMDYTACKIRCRDNCSCVAYANISTGGGTGCLLWFNELVDLSSNGGQDLYTKIPAPVPPNNNTIVHPASDPADHRNLKIKTVAITVGVTTFGLIIIYVWIWIIKNPGAARKFYKQNFRKVKRMKEIDLPTFDLSVLANATENFSSKHKLGEGGFGPVYKGTLIDGKVIAVKRLSKKSKQGLDELKNEVALIAKLQHRNLVKLLGCCIEGEEKMLIYEYMPNLSLDCFLFDETKKKLLDWPKRFNIISGITRGLVYLHQDSRLRIIHRDLKTSNILLDDNLDPKISDFGLARSFLEDQVEANTNRVAGTCGYMPPEYAAGGRFSVKSDVFSYGVIVLEIVSGKRNTEFANSENYNNILGHAWTLWTEDRALELLDDVVGEQCKPYEVIRCIQVGLLCVQQRPQDRPHMSSVLSMLSGDKLLPKPMAPGFYSGTNVTSEATSSSANHKLWSVNEASITELDAR 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01311 835 Gene3D Phosphorylase Kinase; domain 1 479 592 - -
Gma12g01311 835 SUPERFAMILY Protein kinase-like (PK-like) 501 788 IPR011009 -
Gma12g01311 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Gma12g01311 835 CDD B_lectin 25 156 IPR001480 -
Gma12g01311 835 Gene3D Transferase(Phosphotransferase) domain 1 593 794 - -
Gma12g01311 835 SMART ntp_6 351 427 IPR003609 -
Gma12g01311 835 PIRSF SRK 1 835 IPR024171 GO:0004674
Gma12g01311 835 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 14 832 - -
Gma12g01311 835 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 14 832 - -
Gma12g01311 835 CDD STKc_IRAK 523 788 - -
Gma12g01311 835 ProSiteProfiles Protein kinase domain profile. 517 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01311 835 SMART blect_4 25 156 IPR001480 -
Gma12g01311 835 Pfam D-mannose binding lectin 67 182 IPR001480 -
Gma12g01311 835 Pfam Protein tyrosine and serine/threonine kinase 519 787 IPR001245 GO:0004672|GO:0006468
Gma12g01311 835 ProSiteProfiles PAN/Apple domain profile. 348 428 IPR003609 -
Gma12g01311 835 Pfam S-locus glycoprotein domain 215 325 IPR000858 GO:0048544
Gma12g01311 835 Pfam PAN-like domain 348 415 IPR003609 -
Gma12g01311 835 CDD PAN_AP_plant 345 428 - -
Gma12g01311 835 ProSiteProfiles Bulb-type lectin domain profile. 19 143 IPR001480 -
Gma12g01311 835 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 187 IPR036426 -
Gma12g01311 835 Gene3D - 13 153 IPR036426 -
Gma12g01311 835 SMART serkin_6 517 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01311 Gma-Chr12 18999612 19003863 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01311 497 835 Receptor kinase-like Gene Family AT4G23140 52.571 2.58e-121 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma12g01311 PK_Tyr_Ser-Thr 8.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01311 - - gsj:114378849 1686.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01311 12 18999612 19003863 Gma12g01311 12 18999612 19003863 ECH