Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01308 ATGAAAGAGAACGTACCAAAAACAATGGAAAACTTTGATATTCTTGGTGTGTGCCTTTTGTTCCTCTCCTTGATAACCATGTCCTCCACGTTGGACATGGTTACAACAATTCAACCAATCAGAGATGGTAAGAATGAGAATGAAACTCTGGTTTCAACAAATGGAACCTTTGAAGCAGGATTCTTCAGCCCAGAAAACTTCGACAGCCGTTACCTCGGAATTTGGTACACAAATATATTTCCAAGAACAGTTGTTTGGGTAGCCAACAAAGAAAAACCACTTAAAGACCACTCTGGAGTCTTAGAAGTAGACACTGATCAAGGCATTCTTAGTATCAAGGATGGTACAGGAGCAAAAATATGGTTCTCAAGTGCATCACACACACCAAACAAACCGGTTGCGGCGGAGTTGTTAGAATCAGGAAACATGGTTCTTAAAGATGGAGACAATAACTTTTTGTGGCAAAGCTTTGATTACCCTGGTGACACTTTACTTCCAGGAATGAAAATTGGAGTGAACTTCAAAACCGGTCAACATCGAGCTCTAAGATCATGGAGATCCTTTACGGATCCTACTCCAGGTAATTTTTCACTTGGTGTTGATACTCGTGGCCTTCCTCAATTAGTTATTACAAATGAGAATACTAATAGTAATGACATAGCTTATAGACCAGGGTCATGGAATGGTCTTAGTATCACGGGGCTTCCTGGAGAAATAACTGACCAATTAACAAAATCCCTTTTTGTTATGAATCAAGATGAGGTCTTCTATGAGATTCAGCTCTTGAATAGTTCAACTAAACTCATGAGAAGCAGATTGCTTCCAGAAGGGTATCAAGTACGTTTTATATGGTCAGATGAGAAAAAAATATGGGATTCTCAATTCCCTAAACCATTTGATGTGTGTCAGACATATGCCTTGTGTGGTGCAAATGCTATTTGCGATTTCAATGGAAAAGCTAAACACTGTGGATGCTTGAGTGGATTCAAAGCCAACTCTGCTGGTTCAATTTGTGCTCGAACTACCCGTCTAGATTGTAATAAGGGAGGTATAGATAAATTTCAGAAGTATAAGGGAATGAAATTGCCTGACACATCTTCATCTTGGTATGATAGGACTATTACTACTCTTCTGGAATGTGAAAAATTGTGCTTGAGCAATTGCTCTTGTACTGCATATGCTCAATTGAATATCAGTGGCGAGGGAAGTGGCTGCTTGCATTGGTTTTCTGACATTGTTGACATCAGGACACTCCCAGAGGGAGGACAAAATTTTTATTTACGAATGGCTACAGTTACAGCTTCAGAGTTACAATTACAAGATCACCGCTTCAGCAGGAAGAAATTAGCAGGAATTGTGGTTGGCTGTACTATCTTCATCATTGCGGTTACTGTATTCGGATTGATATTTTGCATTAGGAGGAAGAAACTCAAGCAGTCAGAAGCAAATTATTGGAAAGACAAGAGTAAGGAGGATGACATTGATTTACCAATATTTCACTTTTTATCCATCTCCAATGCCACAAATCAGTTTTCAGAGAGTAACAAATTGGGACAAGGCGGCTTTGGACCTGTGTACAAGGGCATATTGCCAGATGGGCAAGAGATTGCAGTTAAGAGACTTTCTAAAACTTCTGGACAAGGTTTGGACGAGTTCAAAAATGAAGTCATGTTGGTTGCAAAACTTCAACACCGCAATCTTGTAAAACTTCTTGGTTGTTCAATTCAGCAAGATGAAAAGTTGTTGGTTTATGAATTCATGCCAAATAGAAGCTTGGACTACTTTATTTTTGATTCAACAAGACGCACATTATTAGGTTGGGCTAAGCGATTCGAAATTATTGGTGGAATTGCTCGAGGACTTCTATATCTTCATCAAGACTCTAGACTAAAAATCATTCATAGGGATCTCAAGACTGGTAATGTTCTTCTCGATAGTAATATGAACCCAAAAATATCAGATTTTGGTATGGCTAGGACATTTGGGCTGGATCAAGATGAAGCAAACACAAATAGAGTGATGGGAACATATGGTTATATGCCTCCTGAATATGCTGTCCATGGATCTTTTTCAGTCAAATCTGATGTCTTTAGCTTTGGTGTGATTGTGTTGGAGATAATCAGTGGAAGGAAGAACAGGGGATTTTGTGACCCACACAATCATCTAAATCTTCTTGGACATGCATGGAGACTATGGATTGAGAAAAGACCATTGGAACTTATGGATGACTCAGCGGACAATCTAGTCGCTCCATCTGAAATATTAAGATATATTCATATTGGTTTGTTATGCGTACAACAAAGACCAGAAGATAGGCCAAACATGTCTTCGGTAGTTTTAATGCTGAATGGTGAAAAGTTATTGCCCGAGCCAAGTCAACCCGGGTTCTACACAGGAGGAAGAGACCATTCAACCGTGACAAATTCTTCTTCAAGAAATTGTGAAGCGTACTCCCTCAACGAAATGTCTGACTCATTGCTCAAGCCAAGATAG 2493 0.3935 MKENVPKTMENFDILGVCLLFLSLITMSSTLDMVTTIQPIRDGKNENETLVSTNGTFEAGFFSPENFDSRYLGIWYTNIFPRTVVWVANKEKPLKDHSGVLEVDTDQGILSIKDGTGAKIWFSSASHTPNKPVAAELLESGNMVLKDGDNNFLWQSFDYPGDTLLPGMKIGVNFKTGQHRALRSWRSFTDPTPGNFSLGVDTRGLPQLVITNENTNSNDIAYRPGSWNGLSITGLPGEITDQLTKSLFVMNQDEVFYEIQLLNSSTKLMRSRLLPEGYQVRFIWSDEKKIWDSQFPKPFDVCQTYALCGANAICDFNGKAKHCGCLSGFKANSAGSICARTTRLDCNKGGIDKFQKYKGMKLPDTSSSWYDRTITTLLECEKLCLSNCSCTAYAQLNISGEGSGCLHWFSDIVDIRTLPEGGQNFYLRMATVTASELQLQDHRFSRKKLAGIVVGCTIFIIAVTVFGLIFCIRRKKLKQSEANYWKDKSKEDDIDLPIFHFLSISNATNQFSESNKLGQGGFGPVYKGILPDGQEIAVKRLSKTSGQGLDEFKNEVMLVAKLQHRNLVKLLGCSIQQDEKLLVYEFMPNRSLDYFIFDSTRRTLLGWAKRFEIIGGIARGLLYLHQDSRLKIIHRDLKTGNVLLDSNMNPKISDFGMARTFGLDQDEANTNRVMGTYGYMPPEYAVHGSFSVKSDVFSFGVIVLEIISGRKNRGFCDPHNHLNLLGHAWRLWIEKRPLELMDDSADNLVAPSEILRYIHIGLLCVQQRPEDRPNMSSVVLMLNGEKLLPEPSQPGFYTGGRDHSTVTNSSSRNCEAYSLNEMSDSLLKPR 830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01308 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Gma12g01308 830 SMART serkin_6 511 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01308 830 SMART blect_4 41 160 IPR001480 -
Gma12g01308 830 ProSiteProfiles PAN/Apple domain profile. 346 430 IPR003609 -
Gma12g01308 830 Pfam D-mannose binding lectin 83 186 IPR001480 -
Gma12g01308 830 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 31 799 - -
Gma12g01308 830 ProSiteProfiles Protein kinase domain profile. 511 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01308 830 Pfam PAN-like domain 349 415 IPR003609 -
Gma12g01308 830 Pfam S-locus glycoprotein domain 222 332 IPR000858 GO:0048544
Gma12g01308 830 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 191 IPR036426 -
Gma12g01308 830 CDD STKc_IRAK 517 784 - -
Gma12g01308 830 Gene3D Hepatocyte Growth Factor 347 430 - -
Gma12g01308 830 Gene3D - 34 157 IPR036426 -
Gma12g01308 830 Gene3D Transferase(Phosphotransferase) domain 1 587 788 - -
Gma12g01308 830 Gene3D Phosphorylase Kinase; domain 1 485 586 - -
Gma12g01308 830 ProSiteProfiles Bulb-type lectin domain profile. 35 158 IPR001480 -
Gma12g01308 830 PIRSF SRK 6 830 IPR024171 GO:0004674
Gma12g01308 830 MobiDBLite consensus disorder prediction 791 811 - -
Gma12g01308 830 SUPERFAMILY Protein kinase-like (PK-like) 495 782 IPR011009 -
Gma12g01308 830 CDD B_lectin 47 160 IPR001480 -
Gma12g01308 830 CDD PAN_AP_plant 342 430 - -
Gma12g01308 830 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 31 799 - -
Gma12g01308 830 SMART ntp_6 349 429 IPR003609 -
Gma12g01308 830 Pfam Protein tyrosine and serine/threonine kinase 514 780 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01308 Gma-Chr12 18931783 18935789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01308 465 806 Receptor kinase-like Gene Family AT3G45860 57.714 8.33e-132 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma12g01308 PK_Tyr_Ser-Thr 2.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01308 - - gmx:100802416 1698.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01308 12 18931783 18935789 Gma12g01308 12 18931783 18935789 ECH
Gma12g01308 12 18931783 18935789 Gma06g02349 06 44681057 44715282 GST
Gma12g01308 12 18931783 18935789 Gma13g02504 13 39946349 39950479 PCT