Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01306 ATGTTATGTATTTGGTTCTTCTTATTGTTGGGAACTTCCACTTCACTAGACAGTTTGGCAGTGGGTCAATCCCTCCGAGATGTTGAGAATGAGTCTTTGGTTTCAGCAGGTGGAATTACTGAACTGGGTTTCTTTAGTCTTGGCGATTTCTCAAGACGATATTTGGGTGTGTGGTTCAGAAATATAAACCCTAGTACAAAGGTATGGGTGGCTAACCGAAATACACCTCTCAAGAAAAACTCAGGAGTTCTGAAACTCAATGAAAGAGGGGTTCTTGAGCTTCTCAATGATAAAAACAGCACCATTTGGTCATCCAATATATCAAGCATAGCACTGAATAATCCAATTGCTCATCTTTTGGATTCAGGAAATTTTGTAGTGAAATATGGACAGGAAACAAACGATGACAGCCTCTTGTGGCAGAGTTTTGATTATCCAGGTAACATATTGTTGCCAGGAATGAAACTTGGATGGAACTTGGAGACTGGTCTAGAAAGATTTCTATCATCTTGGACAAGTTCTAACGATCCTGCTGAGGGAGACTACGCTGCAAAAATTGATCTTAGAGGATATCCTCAAATAATTAAGTTCCAGCGATCCATTGTGGTATCAAGAGGAGGATCATGGAACGGCATGTCTACATTTGGTAACCCGGGTCCAACTAGTGAAGCATCACAAAAACTTGTGTTAAATGAAAAAGAGGTGTATTATGAGTACGAGCTTCTTGATAGGTCGGTCTTCACAATATTGAAACTGACCCATTCAGGCAATTCGATGACTTTGGTTTGGACAACTCAAAGCAGCACCCAGCAGGTAGTCTCAACTGGGGAGATAGATCCATGCGAGAATTATGCCTTTTGTGGTGTAAATTCTATATGCAATTATGATGGAAACGTTACAATATGTAAATGCTCGAGAGGATATGTTCCCAGTTCTCCTGATCGATGGAATATAGGAGTTTCATCTGACGGTTGTGTTCCAAAGAATAAATCTAATGACAGCAACAGTTATGGAGATAGCTTCTTCAAGTATACAAACTTGAAATTGCCAGACACCAAAACATCATGGTTTAATAAGACGATGGACCTTGATGAATGTCAGAAGTCATGCCTTAAAAATAGGTCTTGTACAGCATATGCAAATTTAGATATCCGTGATGGAGGAAGTGGCTGTCTACTTTGGTTTCATGGTCTATTTGATATGAGGAAATACTCTCAAGGGGGACAAGACTTGTACGTTAGAGTCCCTGCTTCAGAATTAGATCATGTTGGCCATGGAAACATGAAGAAAAAGATAGTAGGAATCATTGTTGGTGTGACTACTTTTGGATTAATCATTACATGTGTATGCATATTGATAATTAAAAATCCTGGGTCTGCAAGAAAATTTTACAGCAACAATTACAAAAACATACAGAGAAAGGAAGATGTTGATTTGCCAGTTTTCAGTTTGTCAGTTTTAGCTAATGTCACCGAAAACTTCTCAACCAAAAACAAGCTTGGAGAAGGTGGCTTTGGACCAGTATACAAGGGAACCATGATAGATGGGAAAGTGTTAGCTGTGAAAAGGCTTTCAAAGAAGTCTGGACAAGGGTTGGAAGAGTTCAAGAATGAAGTGACATTGATTTCCAAACTTCAGCACCGTAATCTTGTAAAACTTCTTGGTTGCTGCATTGAAGGAGAAGAAAAAATGTTGATTTATGAATACATGCCCAACCACAGCTTGGACTACTTTGTTTTCGATGAAACGAAAAGGAAGTTGCTAGATTGGCATAAGCGTTTCAATGTTATTACTGGCATTGCTCGAGGACTTCTCTATCTTCATCAAGACTCTAGGCTGAGAATTATTCATAGAGATCTTAAAACTAGTAATATTTTACTGGATGCAAATTTGGATCCCAAAATATCAGACTTTGGGTTGGCGCGATCATTTTTGGGAGATCAAGTTGAGGCAAACACAAATAGGGTGGCTGGAACATATGGTTACATGCCTCCTGAGTATGCTGCACGGGGGCATTTCTCAGTTAAATCGGATGTCTTTAGTTACGGCGTGATAGTACTAGAGATTGTAAGTGGGAAGAAAAACAGGGATTTTTCGGACCCAGAACACTACAATAATCTACTTGGACATGCGTGGAGGTTATGGACTGAAGAGAGGGCATTGGAACTATTGGATAAACTGTCAGGAGAATGCTCGCCCTCTGAAGTCGTACGATGCATACAAGTAGGCCTATTATGTGTGCAACAAAGACCACAAGATAGGCCACACATGTCATCAGTGGTATTAATGTTGAATGGTGACAAATTACTGCCAAAGCCAAAGGTTCCTGGATTTTACACTGGAACAGATGTTACATCTGAAGCGTTGGAAAATCACAGACTGTGCTCAGTTAACGAACTTTCCATCACAATGTTAGATGCAAGATAA 2427 0.3972 MLCIWFFLLLGTSTSLDSLAVGQSLRDVENESLVSAGGITELGFFSLGDFSRRYLGVWFRNINPSTKVWVANRNTPLKKNSGVLKLNERGVLELLNDKNSTIWSSNISSIALNNPIAHLLDSGNFVVKYGQETNDDSLLWQSFDYPGNILLPGMKLGWNLETGLERFLSSWTSSNDPAEGDYAAKIDLRGYPQIIKFQRSIVVSRGGSWNGMSTFGNPGPTSEASQKLVLNEKEVYYEYELLDRSVFTILKLTHSGNSMTLVWTTQSSTQQVVSTGEIDPCENYAFCGVNSICNYDGNVTICKCSRGYVPSSPDRWNIGVSSDGCVPKNKSNDSNSYGDSFFKYTNLKLPDTKTSWFNKTMDLDECQKSCLKNRSCTAYANLDIRDGGSGCLLWFHGLFDMRKYSQGGQDLYVRVPASELDHVGHGNMKKKIVGIIVGVTTFGLIITCVCILIIKNPGSARKFYSNNYKNIQRKEDVDLPVFSLSVLANVTENFSTKNKLGEGGFGPVYKGTMIDGKVLAVKRLSKKSGQGLEEFKNEVTLISKLQHRNLVKLLGCCIEGEEKMLIYEYMPNHSLDYFVFDETKRKLLDWHKRFNVITGIARGLLYLHQDSRLRIIHRDLKTSNILLDANLDPKISDFGLARSFLGDQVEANTNRVAGTYGYMPPEYAARGHFSVKSDVFSYGVIVLEIVSGKKNRDFSDPEHYNNLLGHAWRLWTEERALELLDKLSGECSPSEVVRCIQVGLLCVQQRPQDRPHMSSVVLMLNGDKLLPKPKVPGFYTGTDVTSEALENHRLCSVNELSITMLDAR 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01306 808 PIRSF SRK 1 808 IPR024171 GO:0004674
Gma12g01306 808 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Gma12g01306 808 ProSiteProfiles EGF-like domain profile. 277 314 IPR000742 -
Gma12g01306 808 Pfam PAN-like domain 337 401 IPR003609 -
Gma12g01306 808 CDD STKc_IRAK 500 766 - -
Gma12g01306 808 ProSiteProfiles Bulb-type lectin domain profile. 18 140 IPR001480 -
Gma12g01306 808 Gene3D Transferase(Phosphotransferase) domain 1 570 770 - -
Gma12g01306 808 Gene3D Phosphorylase Kinase; domain 1 457 569 - -
Gma12g01306 808 SMART serkin_6 494 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01306 808 Pfam D-mannose binding lectin 66 171 IPR001480 -
Gma12g01306 808 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 11 806 - -
Gma12g01306 808 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 11 806 - -
Gma12g01306 808 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 177 IPR036426 -
Gma12g01306 808 SMART blect_4 24 146 IPR001480 -
Gma12g01306 808 Pfam S-locus glycoprotein domain 205 311 IPR000858 GO:0048544
Gma12g01306 808 CDD PAN_AP_plant 333 416 - -
Gma12g01306 808 ProSiteProfiles PAN/Apple domain profile. 325 416 IPR003609 -
Gma12g01306 808 ProSiteProfiles Protein kinase domain profile. 494 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01306 808 SMART ntp_6 336 415 IPR003609 -
Gma12g01306 808 Gene3D Hepatocyte Growth Factor 334 413 - -
Gma12g01306 808 CDD B_lectin 30 146 IPR001480 -
Gma12g01306 808 Pfam Domain of unknown function (DUF3403) 770 808 IPR021820 GO:0004674
Gma12g01306 808 SUPERFAMILY Protein kinase-like (PK-like) 478 764 IPR011009 -
Gma12g01306 808 Gene3D - 12 143 IPR036426 -
Gma12g01306 808 Pfam Protein tyrosine and serine/threonine kinase 496 762 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01306 Gma-Chr12 18908192 18911496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01306 482 808 Receptor kinase-like Gene Family AT4G11530 55.786 3.83e-122 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma12g01306 PK_Tyr_Ser-Thr 2.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01306 - - gmx:100819141 1615.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01306 12 18908192 18911496 Gma06g02356 06 44997403 45000991 GST