Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01300 ATGGATATTCTTTCTTCATTGATCTTTGTTGCAAGTATACTTATCCCTTGTTTCAAATTCTGCATAGCAGCTGATACCATTCTTCTGTCCCAATCCATTAGTGATGGCATGACCTTGGTTTCTCGAGGTGAAACATTTGAACTTGGTTTCTTCAGTCCCGAGAACTCCAACAAACGTTATCTCGGAATTTGGTACAAGAATATCCCCCAGACAGTTGTTTGGGTTTCGAACAGGGCCATCAATGATTCCTCAGGCATCTTAACAGTGAACAGTACAGGAAACCTTGTCCTCAGACAGCATGACAAGGTTGTCTGGTACACAACATCTGAGAAACAAGCACAGAATCCAGTGGCGCAGCTTCTAGATTCAGGGAATCTTGTTGTAAGAGATGAGAGTGAAGCAGACTCAGAAGGATATTTATGGCAAAGCTTTGACTACCCTTCAGATACAATACTTCCAGGCATGAAGTTGGGATTGAACCTCAGAACTGGTATTGAATGGAGAATGACATCTTGGAAGAATCCCAATGATCCATCCCCAGGAGACTTTTATTGGGGTCTTTTGCTTTATAATTATCCTGAGTTTTATCTGATGATGGGAACAGAAAAGTTTGTGAGAGTTGGACCATGGAATGGCCTGCATTTCAGTGGCATACCAGATCAAAAGCCTAACCCGATTTATGCTTTCAACTACATATCCAACAAGGATGAGAAGTACTACACTTATAGCCTACAGAATGCTGCTGTGATCTCAAGATTGGTAATGAATCAAACCTCTTCAATGAGTATTAGATACGTATGGATGGAAAACGAACAATATTGGAAGGTCTATAAATCGCTGCCAAAAGACAACTGTGACTATTATGGCACATGTGGAGCCTATGGGACTTGCTTGATTACAGGCTCCCAAATATGCCAGTGCTTAGCAGGGTTCAGTCCCAAGTCACCACAAGCATGGAACTCATCTGACTGGACTCAAGGATGCACACGGAATCAGCCATTAAATTGCACTAACAAGCTCAATGATGGATTTATGAAAGTGGAAGGTGTGAAAGTGCCAGATACTACACATACTTGGTTAGATGAGACAATAGGTCTTGGAGAGTGCAGAATGAAGTGCTTGAATAATTGTTCTTGTATGGCATATACTAATTCAGACATAAGAGGTGAAGGTAGTGGCTGTGTCATGTGGTTTGGTGATCTAATTGATATTAGGCAGTTTGAAAATGATGGGCAGGATCTGTATATTCGAATGGATTCTTCAGAATTAGGGGAACACGAAGAGCACAAGAAGGTGGTGATCATAATAGTTTCTACCACCATTGCTACAATTTTAGTAATTCTTTGTATTGGTTGTTATCGTATATACATTGTGCGGCACAGCATAACTGAGTATTCAGATATTGTACGTGATCAAAATAGGGGAGGAAGTGAAGAAAATATCGATCTCCCCTTACTTGACCTTTCAACAATAGTCATTGCCACTGATAACTTCTCAATAAACAACAAGATTGGAGAAGGTGGTTTTGGACCAGTATACAAGGGAAGATTAGTAAGTGGACAAGAAATTGCTGTGAAGAGGCTCTCAAGAGGCTCGGGACAAGGAATGACAGAGTTCAAGAATGAAGTCAAACTGATTGCTAAACTTCAGCACCGAAATCTTGTTAAGCTTCTTGGTTGTTGCGTTCAAGAACAAGACAGAATGCTGGTTTATGAGTACATGACTAATCGTAGCTTGGATTGGTTGATTTTTGATGATACTAAAAGCAAACTGCTAGATTGGCCTAAGCGTTTCAACATTATCTGTGGAATTGCTCGAGGTCTTCTTTATCTTCATCAAGATTCTAGATTGAGGATAATTCATAGAGACCTCAAAGCAAGTAATGTTTTGCTCGATGACCAGATGATCCCTAAAATATCAGATTTTGGCATTGCTAGAATATTTGGAGGAGAGCAGACAGAAGGAAATACAAATCGAGTTGTTGGAACTTACGGCTACATGGCACCAGAATATGCAGCTGATGGTATTTTTTCTGTGAAAACTGACGTTTTCAGTTTTGGTATTTTGTTGCTGGAGATTTTAAGTGGAAAGAGAAACAGAGGATTTTATCTTGAAAACCAATCTGCAAACCTTGTCACTCATGCATGGAATCTGTGGAAAGGGGGCAGGGCTATAGAAATGGTTGACTCAAACATAGAGGACTCTTGTGTTCTATCAGAGGTATTGCGTTGCATCCATGTCTGTCTCTTGTGTGTTCAGCAACACGCAGAGGATAGGCCTCTTATGCCTTCCGTGGTTCTAATGTTGGGGAGTGAAAGTGAATTGGCTGAGCCAAAAGAACCTGGTTTCTACATAAAGAATGATGAAGGTGAAAAAATTTCCATCTCAGGTCAAAGTGATTTATTTTCAACCAATGAAATAACTATCACACTATTAGAAGCCAGATGA 2448 0.4024 MDILSSLIFVASILIPCFKFCIAADTILLSQSISDGMTLVSRGETFELGFFSPENSNKRYLGIWYKNIPQTVVWVSNRAINDSSGILTVNSTGNLVLRQHDKVVWYTTSEKQAQNPVAQLLDSGNLVVRDESEADSEGYLWQSFDYPSDTILPGMKLGLNLRTGIEWRMTSWKNPNDPSPGDFYWGLLLYNYPEFYLMMGTEKFVRVGPWNGLHFSGIPDQKPNPIYAFNYISNKDEKYYTYSLQNAAVISRLVMNQTSSMSIRYVWMENEQYWKVYKSLPKDNCDYYGTCGAYGTCLITGSQICQCLAGFSPKSPQAWNSSDWTQGCTRNQPLNCTNKLNDGFMKVEGVKVPDTTHTWLDETIGLGECRMKCLNNCSCMAYTNSDIRGEGSGCVMWFGDLIDIRQFENDGQDLYIRMDSSELGEHEEHKKVVIIIVSTTIATILVILCIGCYRIYIVRHSITEYSDIVRDQNRGGSEENIDLPLLDLSTIVIATDNFSINNKIGEGGFGPVYKGRLVSGQEIAVKRLSRGSGQGMTEFKNEVKLIAKLQHRNLVKLLGCCVQEQDRMLVYEYMTNRSLDWLIFDDTKSKLLDWPKRFNIICGIARGLLYLHQDSRLRIIHRDLKASNVLLDDQMIPKISDFGIARIFGGEQTEGNTNRVVGTYGYMAPEYAADGIFSVKTDVFSFGILLLEILSGKRNRGFYLENQSANLVTHAWNLWKGGRAIEMVDSNIEDSCVLSEVLRCIHVCLLCVQQHAEDRPLMPSVVLMLGSESELAEPKEPGFYIKNDEGEKISISGQSDLFSTNEITITLLEAR 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01300 815 CDD PAN_AP_plant 332 417 - -
Gma12g01300 815 Pfam D-mannose binding lectin 71 173 IPR001480 -
Gma12g01300 815 Pfam PAN-like domain 336 404 IPR003609 -
Gma12g01300 815 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 31 814 - -
Gma12g01300 815 CDD B_lectin 30 147 IPR001480 -
Gma12g01300 815 ProSiteProfiles EGF-like domain profile. 281 317 IPR000742 -
Gma12g01300 815 Pfam Protein tyrosine and serine/threonine kinase 499 765 IPR001245 GO:0004672|GO:0006468
Gma12g01300 815 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 31 814 - -
Gma12g01300 815 ProSiteProfiles Protein kinase domain profile. 498 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01300 815 Gene3D - 20 144 IPR036426 -
Gma12g01300 815 CDD STKc_IRAK 504 769 - -
Gma12g01300 815 SMART serkin_6 498 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01300 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Gma12g01300 815 ProSiteProfiles PAN/Apple domain profile. 336 419 IPR003609 -
Gma12g01300 815 PIRSF SRK 1 815 IPR024171 GO:0004674
Gma12g01300 815 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 178 IPR036426 -
Gma12g01300 815 Gene3D Phosphorylase Kinase; domain 1 466 573 - -
Gma12g01300 815 SMART blect_4 30 147 IPR001480 -
Gma12g01300 815 ProSiteProfiles Bulb-type lectin domain profile. 24 141 IPR001480 -
Gma12g01300 815 SMART ntp_6 339 418 IPR003609 -
Gma12g01300 815 SUPERFAMILY Protein kinase-like (PK-like) 482 769 IPR011009 -
Gma12g01300 815 Pfam S-locus glycoprotein domain 206 315 IPR000858 GO:0048544
Gma12g01300 815 Pfam Domain of unknown function (DUF3403) 772 815 IPR021820 GO:0004674
Gma12g01300 815 Gene3D Transferase(Phosphotransferase) domain 1 574 782 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01300 Gma-Chr12 18411881 18415974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01300 486 787 Receptor kinase-like Gene Family AT4G23230 60.066 7.51e-126 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma12g01300 PK_Tyr_Ser-Thr 3.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01300 - - gmx:100775648 1658.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01300 12 18411881 18415974 Gma06g02367 06 45193943 45197222 GST