Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01295 ATGAGAACGGGAAACTGCTACTATGTAGCAAACGAGCAGACAAACAAACTTCAAAATGGGGTTCCTGAATGCATTGACAAGGTAGCACATGCAGGAATTAAGCTATGGGTTCTGACTGCTGATAAAATGGAGACAACAATCAATATTGGACAAGCTATTTCTGGACTCAGAACCCAAGAGCAAATGGTCATCAAGGCACAACTTAATTGTTGGGCCTGGTTTCTTGCCCTCTACCTTTAG 240 0.425 MRTGNCYYVANEQTNKLQNGVPECIDKVAHAGIKLWVLTADKMETTINIGQAISGLRTQEQMVIKAQLNCWAWFLALYL 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01295 79 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 15 65 - -
Gma12g01295 79 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 15 65 - -
Gma12g01295 79 Gene3D - 9 73 IPR023214 -
Gma12g01295 79 SUPERFAMILY HAD-like 14 56 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01295 Gma-Chr12 18236097 18237606 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01295 15 64 Primary Pumps ATPases AT3G25610 70.000 1.08e-18 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01295 K01530 K14802 twl:119987190 75.0997