Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01285 ATGAAATTTCTTTCTTTCATGATTATGGTTGCTTACATACTTGTTTCCTCTCTCAGAATTTCCATAGCAAATGATTCCATGAACGTCCTCCAGTCTATGAGTGACGGGGTGAGCTTGGTGTCAAAAGGTGGAAAGTTCGAATTTGGTTTTTTCGTCCAGACAGTTGTTTGGGTTGCTAATAAGGCCAACCCCATCAATGATTCCTCGGGTATCATAACACTCAACAACACAGGCAATCTTGTTCTCACCCAAAATGCGTATCTTGTCTGGTACACCAACAACTCTCACAAACAAGCACAGAATCCTGTAGTAGTGCTTTTGGACAGTGGCAATCTTGTGATAAAAAACGAGGAAGAAACAGACCCAGAAGTGTGTTTGTGGCAAAGCTTTGACTATCCATCTGATACACTCTTGCCAGGGATGAAGTTGGAACGGAACATCCGAACTGGTCATGAGTGGAAACTAACTTCTTGGAAGAATCCAAATGATCCATCCCCTGGAGACATTTATCGGGTTTTAGAACTCTATAACTATCCTGAGCTTTATGTAATGAAAGGAAAGAAAAAGGCACAAGGATGCCAGTGTTTGAAAGGGTTTAGTCCAAAGTCACCACAAGCATGGGCTTCATCTGATTGGAGTCAAGGATGTGTCCGCAATAAACCGTTAAGTTGCAACGGCGAACATAAAGATGGGTTTGTCAAATTTGAAGGCCTTAAAGTTCCTGATACTACACAGACTTGGTTGGATAAGACTATTGGTCTGGAGGAATGCAGAGTGAAGTGCTTGAATAATTGTTCTTGTATGGCCTACAGTAATTCAGACATAAGAGGTGCAGGTAGTGGTTGTGTCATGTGGTATGGAGATCTCATTGACATTAGACAATTTGAAACGGGTGGGCAAGGTCTACATATCAGGATGTCTGCTTCAGAGTCAGTAACAAATTACTCGAAGGACAAGAGTGAGAAGGATATTGATTTACCAACATTTGATTTTTCATTCATTTCTAATGCCACAAATGACTTTTCGCAAAGTGAAAAATTGGGACAAGGCGGCTTTGGATCCGTGTACAAGGGCATATTGCCAGATGGGCAAGAGATTGCAGTCAAAAGGCTTTCTAAAACTTCTGGACAAGGTTTGGATGAATTCAAAAATGAAGTCATGTTGATTGCAAAACTTCAACACCGCAATCTCGTAAAGCTTCTTGGTTGTTCTATCCAACAAGATGAGAAATTGTTGATATATGAATTCATGCCAAATAGAAGCTTGGATTACTTTATTTTTGATTCAACAAGGCACACATTATTAGGTTGGACTAAGCGATTTGAAATTATTGGTGGAATTGCTCGAGGACTTCTCTATCTTCATCAAGACTCTAGACTAAAGATCATTCACAGGGATCTCAAAACTAGTAACGTTCTTCTTGATAGTAATATGAACCCAAAAATATCAGATTTTGGTATGGCTAGGACATTTGGGTTAGATCAAGATGAAGCAAATACAAATAGAGTAATGGGAACATATGGTTATATGCCTCCTGAATATGTAGTACATGGATCTTTCTCAGTCAAATCTGATGTTTTCAGCTTTGGTGTGATTGTGCTAGAGATAATCAGTGGGAAGAAGAATAGGGCGTTTTATGACCCACACCATCACCTAAATCTTCTTGGGCATGCATGGAGACTGTGGATTGAAAAGAGGCCAACAGAACTTATGGATGACTTGGTCGATAATTCAGCTTGTCCATCTGAAATAATAAGATATATTCATATTGGTTTGTTATGTGTACAACAAAGACCTGAGGATAGACCAAACATGTCATCAGTAACTTTATTCTTGAATGGCGAGAAGTTATTACCCGAGCCAAATCAACCTGGGTTCTATACAGGAAAAGCTCATCCAACCAAGCCAAATTCTTCCTCAAGAAATATTGATGTATATTCCTTCAATGAAATGTCTAACTCATTGTTGGAGCCAAGGTAA 1980 0.3939 MKFLSFMIMVAYILVSSLRISIANDSMNVLQSMSDGVSLVSKGGKFEFGFFVQTVVWVANKANPINDSSGIITLNNTGNLVLTQNAYLVWYTNNSHKQAQNPVVVLLDSGNLVIKNEEETDPEVCLWQSFDYPSDTLLPGMKLERNIRTGHEWKLTSWKNPNDPSPGDIYRVLELYNYPELYVMKGKKKAQGCQCLKGFSPKSPQAWASSDWSQGCVRNKPLSCNGEHKDGFVKFEGLKVPDTTQTWLDKTIGLEECRVKCLNNCSCMAYSNSDIRGAGSGCVMWYGDLIDIRQFETGGQGLHIRMSASESVTNYSKDKSEKDIDLPTFDFSFISNATNDFSQSEKLGQGGFGSVYKGILPDGQEIAVKRLSKTSGQGLDEFKNEVMLIAKLQHRNLVKLLGCSIQQDEKLLIYEFMPNRSLDYFIFDSTRHTLLGWTKRFEIIGGIARGLLYLHQDSRLKIIHRDLKTSNVLLDSNMNPKISDFGMARTFGLDQDEANTNRVMGTYGYMPPEYVVHGSFSVKSDVFSFGVIVLEIISGKKNRAFYDPHHHLNLLGHAWRLWIEKRPTELMDDLVDNSACPSEIIRYIHIGLLCVQQRPEDRPNMSSVTLFLNGEKLLPEPNQPGFYTGKAHPTKPNSSSRNIDVYSFNEMSNSLLEPR 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01285 659 PANTHER - 192 319 - -
Gma12g01285 659 Gene3D Transferase(Phosphotransferase) domain 1 417 617 - -
Gma12g01285 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Gma12g01285 659 PANTHER - 9 187 - -
Gma12g01285 659 PANTHER - 192 319 - -
Gma12g01285 659 SUPERFAMILY alpha-D-mannose-specific plant lectins 54 164 IPR036426 -
Gma12g01285 659 CDD PAN_AP_plant 221 305 - -
Gma12g01285 659 ProSiteProfiles Bulb-type lectin domain profile. 5 127 IPR001480 -
Gma12g01285 659 Gene3D Phosphorylase Kinase; domain 1 303 416 - -
Gma12g01285 659 ProSiteProfiles PAN/Apple domain profile. 224 308 IPR003609 -
Gma12g01285 659 SUPERFAMILY Protein kinase-like (PK-like) 325 610 IPR011009 -
Gma12g01285 659 CDD B_lectin 31 133 IPR001480 -
Gma12g01285 659 SMART serkin_6 341 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01285 659 PANTHER - 9 187 - -
Gma12g01285 659 MobiDBLite consensus disorder prediction 622 642 - -
Gma12g01285 659 CDD STKc_IRAK 347 608 - -
Gma12g01285 659 Pfam D-mannose binding lectin 54 159 IPR001480 -
Gma12g01285 659 PANTHER - 320 658 - -
Gma12g01285 659 Pfam PAN-like domain 224 292 IPR003609 -
Gma12g01285 659 SMART blect_4 30 133 IPR001480 -
Gma12g01285 659 PANTHER - 320 658 - -
Gma12g01285 659 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Gma12g01285 659 SMART ntp_6 227 306 IPR003609 -
Gma12g01285 659 Pfam Protein tyrosine and serine/threonine kinase 343 609 IPR001245 GO:0004672|GO:0006468
Gma12g01285 659 Gene3D - 19 130 IPR036426 -
Gma12g01285 659 ProSiteProfiles Protein kinase domain profile. 341 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01285 Gma-Chr12 17852542 17857546 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01285 306 627 Receptor kinase-like Gene Family AT3G45860 58.006 2.59e-129 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gma12g01285 PK_Tyr_Ser-Thr 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01285 - - gmx:100801916 779.245