Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01284 ATGGATTTATCAGTCCTTGCACCAGAGATTTCCTTTTCCTCTTTGTCTGATTCACTTGTTTCTTGGGCAGAAACAACATGGGTAGTGAACATGACATCTTTCACAGAAGACAAATTTGACATTCTTAAGCACAACAATCTGAATTCTGCCAAAGCAATAAAGGGAGTTTTGGTCATTCAAATTGGGGTCAATGAACAAGTTCTGTACATGCATTGGAGTAGAGCTGCATCCATAATATTGGATAATTGTGCATTAATTTTCAAAGATTTAAGAGATCCCATAGAGGAAGGTAAGTCTCTTTCAAGCATGTTGTTTGATGTTGCAAAGTTTTGGAGCTCTTCACAGCCTTCAATCTCTTCAAAATTGCAACAACCTACACTACACCTAAACATTAGAATTCTAGGACCAGAAGTGGTTACTGGTCAGAAGCAAGCTATAAATCAATACAATCAATACTTAATTAAAGCTTACAGAGTTGGAGTGCAAGAGGGTGTGGCTAGAGGGTTTGGCTTTGGTTTAGTTTGTCTATTTATTTATTGTACCCATGGTTTGGTAGTGTGGCTTGGAGGGAAGATGGCATCTCCAATCTTAACTGCATCCGATGTAGGACAAGCTGCTACCTTTAAAATGTTTGAAACGATTAAGAAGCAGCCAGATATTGATGCTTATGACACTGGTGGTCGACTGCTAGATGATATTTCTGGAGATATAGAGCTTAAGAAGGTTTGCTTTAGTTATACTTCTAGACCTAATGAGCAAATATTCAATGGATTTTCAATTTCAATACCAAGTGGCATTATTGCAGCTTTGGTAGGGCAAAGTGGAAGTGAGAAATCAACAATTATTAGTTTAATTGATAGATTTTATGATCCACAAGTTGGTGAAGTCTCATTGACGGGACTTGACACGATGGTTGGCAAGCATATTAGAACAAACACTAATTTAAGAGGGGCAATGGGATACGTTGCACCTGAATGGCTAAGGAATGCACCAATAACTGCCAAAGTTAACAAATATAGTTTTGGGGCTAAGGAATGCACCCTGCTTTCAGTGTATGTTTGTGATAACACTATGCTACCCTTAGGGGAGTTGCTATCATAG 1101 0.3833 MDLSVLAPEISFSSLSDSLVSWAETTWVVNMTSFTEDKFDILKHNNLNSAKAIKGVLVIQIGVNEQVLYMHWSRAASIILDNCALIFKDLRDPIEEGKSLSSMLFDVAKFWSSSQPSISSKLQQPTLHLNIRILGPEVVTGQKQAINQYNQYLIKAYRVGVQEGVARGFGFGLVCLFIYCTHGLVVWLGGKMASPILTASDVGQAATFKMFETIKKQPDIDAYDTGGRLLDDISGDIELKKVCFSYTSRPNEQIFNGFSISIPSGIIAALVGQSGSEKSTIISLIDRFYDPQVGEVSLTGLDTMVGKHIRTNTNLRGAMGYVAPEWLRNAPITAKVNKYSFGAKECTLLSVYVCDNTMLPLGELLS 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01284 366 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 138 302 IPR039421 -
Gma12g01284 366 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 228 304 IPR027417 -
Gma12g01284 366 SUPERFAMILY Protein kinase-like (PK-like) 310 350 IPR011009 -
Gma12g01284 366 PANTHER TRANSPORTER ABC DOMAIN PROTEIN 138 302 - -
Gma12g01284 366 Pfam ABC transporter 256 323 IPR003439 GO:0005524
Gma12g01284 366 Gene3D ABC transporter type 1, transmembrane domain 139 192 IPR036640 GO:0005524|GO:0016021
Gma12g01284 366 Gene3D ABC transporter type 1, transmembrane domain 194 226 IPR036640 GO:0005524|GO:0016021
Gma12g01284 366 Gene3D - 227 323 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01284 Gma-Chr12 17807066 17811046 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01284 163 309 Calmodulin-binding Proteins AT2G36910 30.387 3.87e-16 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01284 K05658 - gmx:100777713 257.684