Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01267 ATGTTGTTGGAGGGAGAAATTGGGGTTGAAGTAGGAGGATCAGAGCTGGGAGGGGATGGACATGGAGGAGCCGGAACCATAAAGATTTTCAATGGTGTATTTCTCAAAGTTAACAAAGCCATAGTGAACATGGTGCATAGAGTTGAGCCCTATGTGACTTATGGATACCCAAATCTTAAGAGTGTGAGAGAACTTATTTACAAGAAAGGGTATGGAAAGCTAAACAAGCAGAGGACTGCTCTAACTGACAACTCCATCATTGAGCAGGCTATTAAAGTTTCCAAACGCCAGGCAAAAGTAAGAGAAACACCAGGCAATGCTGAGAATTCTATGaagctggaagcagctgaaacaaagctgcaagagcagaagacaaaCATGGCCATATTGGGAAAAGAAGCAGCTTCCGCAATGGCTGTTGTAAAAGCACAACAACAGAGGTTAACCCTCTAG 453 0.3907 MLLEGEIGVEVGGSELGGDGHGGAGTIKIFNGVFLKVNKAIVNMVHRVEPYVTYGYPNLKSVRELIYKKGYGKLNKQRTALTDNSIIEQAIKVSKRQAKVRETPGNAENSMKLEAAETKLQEQKTNMAILGKEAASAMAVVKAQQQRLTL 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01267 150 Coils Coil 106 133 - -
Gma12g01267 150 Gene3D - 27 99 IPR036919 -
Gma12g01267 150 PANTHER 60S RIBOSOMAL PROTEIN L7 28 91 IPR039699 -
Gma12g01267 150 PANTHER 60S RIBOSOMAL PROTEIN L7 28 91 - -
Gma12g01267 150 SUPERFAMILY Ribosomal protein L30p/L7e 28 91 IPR036919 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01267 Gma-Chr12 17440951 17444527 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01267 28 91 Cytoplasmic Ribosomal Protein Gene Family AT2G44120 82.812 4.89e-34 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01267 K02937 - gmx:100813342 124.02