Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01256 ATGGATGTGTTGCAAATAAGTTTTGATGAGCTCGATGACAAAGATAAGAAAATATTTCTAGATATTGCTTGCTTCTTCGCTGATTATGATGAGGATTATGTTAAGGAAATTATAGATTTTTGCAGATTTCATCCTGAAAATGGCTTACGAGTTCTTCTTGATAAATCACTCATAAGGTTTGAATTTGGGAAGATTTATATGCATGGCTTGTTGAGAGATTTGGGTAGGTATATTGTTCAAGAAGAATCACCTAAAGAGCCAAGAAAATGGAATAGGTTGTGGGATTACAAAGATCTCCACGAAGTTATGTTAGATAATAAGGATATCTTGTTTGGAAAAAAATATCTATTTGAGTGTTTGCCACCATCTTTTCAGCCGCACAAGCTCATTGAGATGTCCCTTCCTGAGAGTAACATGAAACAATTATGGGAAGACAAAAAGGACTTGTTGAGTCAAGCTAAGGAAGAGTTTGGATATGATCATTCCATCGGTGGCCTCGCAATTCCTTGCAGTGAAGATGTTTTCCAACATATAACTTCTTACTTGAATGGACAATAA 558 0.3548 MDVLQISFDELDDKDKKIFLDIACFFADYDEDYVKEIIDFCRFHPENGLRVLLDKSLIRFEFGKIYMHGLLRDLGRYIVQEESPKEPRKWNRLWDYKDLHEVMLDNKDILFGKKYLFECLPPSFQPHKLIEMSLPESNMKQLWEDKKDLLSQAKEEFGYDHSIGGLAIPCSEDVFQHITSYLNGQ 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01256 185 Pfam Auxin responsive protein 148 182 IPR003676 GO:0009733
Gma12g01256 185 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 110 IPR044974 GO:0006952
Gma12g01256 185 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 1 110 - -
Gma12g01256 185 SUPERFAMILY "Winged helix" DNA-binding domain 2 103 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01256 Gma-Chr12 16902320 16904843 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01256 1 95 WRKY Transcription Factor Family AT5G45050 40.000 1.35e-21 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01256 - - gsj:114416974 152.525