Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01247 ATGGCAGCCAAAAGCAAAACTTACCAAGACACAGCAGACACGAGAAGAGGAGCAAAAAGTGCTTTGGTGCCAATGGCTGCAAGGAAAGCAACGTCAGCAGACACAGTAGACATAGTAGACACGAAGCAAGAAAACTTACCAAAGTGCAGCGAAGAGGGTGGCTTTTCGACCAGAGCACGACCAGGtgAAAATAGAAATATTACAGATGTGTTGCGAATAAGTTTTAATGAGTTGGATGATATAGACAAGGAAGTATTTTTAGTTATTGCTTGCTTTTTCTATGATGGTTATAAAGAGCAATATGTAAAGGAAATTCTAGATTTTCGTGGACTTTATCCAGAATATGGCCTACAAGTTCTTGTTGACAAATCATTCATAGTCATTCATGAAGGTTGTATTGAAATGCATGGCTTGTTGAGAGACTTGGGAAGGTGTATTGCTCAAGAAAAATTATGGCATCGCAAAGATCTCTACAAAGTTTTATCTCACAATAAGGCGAAAGTATATCTTGAAGCCATAGTTATCGAATATCATTTTCCTCAAACAATGATGAGGGTCGATGCTCTATCAAAAATGAGTCACCTTAAGTTGCTCACACTTCAGTTCGTGAAATTTTCAGGAAGCCTCAATTATCTCTCCAATGAATTAGGATATCTTAATTGGTTTGAATATCCTTTTGATTGTTTGCCACCAAGTTTTCAGCCAGACAAACTTGTTGAGTTGATCTTGAGATGCAGTAGCATTAAACAATTGTGGGAAGGCACAAAGTTGTTGGATGAATCAAGGGATGTCGAGAATTTGAAGAAGCTTGAAATAGGTGAAGCTCCCATTCATTCCCAATCTTCATCTTCCTATTTGAAAGCACATGATGATTTTGTTAGTTGTTTGTTTCCTTCCTCGCCTATTTTCCAATCTATGCATCAACTAGATCTTAGTTTATGCAATTTACTTCAAATCCCTGATGCTATTGGAAATTTATGA 981 0.3731 MAAKSKTYQDTADTRRGAKSALVPMAARKATSADTVDIVDTKQENLPKCSEEGGFSTRARPGENRNITDVLRISFNELDDIDKEVFLVIACFFYDGYKEQYVKEILDFRGLYPEYGLQVLVDKSFIVIHEGCIEMHGLLRDLGRCIAQEKLWHRKDLYKVLSHNKAKVYLEAIVIEYHFPQTMMRVDALSKMSHLKLLTLQFVKFSGSLNYLSNELGYLNWFEYPFDCLPPSFQPDKLVELILRCSSIKQLWEGTKLLDESRDVENLKKLEIGEAPIHSQSSSSYLKAHDDFVSCLFPSSPIFQSMHQLDLSLCNLLQIPDAIGNL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01247 326 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 59 285 IPR044974 GO:0006952
Gma12g01247 326 SUPERFAMILY L domain-like 184 326 - -
Gma12g01247 326 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 59 285 - -
Gma12g01247 326 SUPERFAMILY "Winged helix" DNA-binding domain 66 161 IPR036390 -
Gma12g01247 326 Pfam Leucine Rich Repeat 237 256 IPR011713 -
Gma12g01247 326 Gene3D Ribonuclease Inhibitor 137 326 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01247 Gma-Chr12 16708664 16710889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01247 68 326 WRKY Transcription Factor Family AT5G45050 29.795 1.51e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01247 - - lja:Lj5g3v1973380.3 227.254