Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01241 ATGAGGCCACCACCTCTTAAAGCATCAAGGGACATTATGGAAATGGAAACTCTAGAAGCAGCAGCACGTGCCTATGACTTGGCAGCATTGAAGTACTGGGGCCAAGATACCATTCTCAATTTTCCACTGTCTTATCCTCCTCCTCTTCTCTCCTCTTCCCGTTACACTTTCTCCACCTTCTCCCTAGTGCCACCATTGCCCCCAACCCCACATTCGTCCTCCGCCCCTATTCCCCTCTCCTCTAGTGAAATTGCAAAAAACCCTAACGCCAAAAAAAACCCAAACCCCTATCGCAACGAAATCTCCACCCCCAAATAG 318 0.4906 MRPPPLKASRDIMEMETLEAAARAYDLAALKYWGQDTILNFPLSYPPPLLSSSRYTFSTFSLVPPLPPTPHSSSAPIPLSSSEIAKNPNAKKNPNPYRNEISTPK 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01241 105 MobiDBLite consensus disorder prediction 68 105 - -
Gma12g01241 105 ProSiteProfiles AP2/ERF domain profile. 1 42 IPR001471 GO:0003700|GO:0006355
Gma12g01241 105 SUPERFAMILY DNA-binding domain 16 44 IPR016177 GO:0003677
Gma12g01241 105 MobiDBLite consensus disorder prediction 75 105 - -
Gma12g01241 105 Gene3D AP2/ERF domain 14 44 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01241 Gma-Chr12 16557617 16558557 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01241 16 56 AP2-EREBP Transcription Factor Family AT3G54320 59.524 6.51e-09 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01241 K09285 - fve:101307913 41.5874