Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01233 ATGGAGGATAGTGTTCTTTCCATCAGAGCAAAGATTGTAGAATATATTGTGGGTCCAATTTTACACCATGCAAAATACTTGTGTTGTTTCAACAACTTTGCTGTGAATCTCCCAAATGCCAAAAGAGAATTGGAATTGACCCTAGAGCAAGTGAAATTACGAGTAAGAGAAGCCACTATTAGGATTGAAAAAATTGAACCAACTGTTGAAGAATGGCTAGAAGAAGTTGAGAAAGTTTTAGCAGAAGTGCAGATTCTCGAAGGAAGAGTTTTGAAAGTGACAAAGAGTAGTTTCATAAGGCAATGTCGATATTTTCTTGCAAAAGAAATGGTAAGAAAAATAGGACAAATGAATCAGCTCAAATGTAACAAGTTAGAGCCCTTTTCTAGGAGTATTAACCTTCCAGACATGAAGTACTATTCTTCCAAAGATTTTGTTCTTTCCAATTCAACAGAATCAACTTACAACAAGCTTTTGGAAACATTAAAGGATAAAAATGTTAGCATAATTGGACTAGTTGGAATAGAAGGCTCGGGAAGAACTACTTTGGCAAATGAGGTGGGTAAGAAAGCTGAGAAGTTAAAACTTTTTGAGAAGGTTGTCATGACAACAGTCTCTCAAAATCTCAATATCATAAGCATCCAAGAACAAATTGCTGATAAGTTGGGTTTCAAATTAGAGGAAGAATCTGAGGAAAGTAGAGCAAAAACATTATCACAGAGTTTAAGGGAGGGCACAACACTTCTAATCTTGGATGATGTATGGGAAAAGCTAAACTTTGAAGATGTAGGTATTCCTCTCAATGAAAACAACAAGAGTTGTGTAATACTCCTAACAACTCAAAGTAGAGAAATATGCACTTCTATGCAATGCCAAAGTATAATTGAGCTCAATCGTTTAACCAACGAGGAATCTTGGATTTTGTTCAAATTGTATGCCAACATAACTGATGACTCTGCAGATGCTTTGAAAAGTGTGGCAAAAAATATTGTTGATGAATGCGAAGGATTCCTAATTTCAATTGTGACTTTGGGAAGCACACTGAAGAAGAAAAGTTTAGGAGATTGGAAGTCAGCATTGAAAAGACTACAAGATTCCAAACCATTGGTTATTACAAAAGGCCTAAAAATTCCTCATGTATGTCTTCAATTAAGTTATGATAACTTGACAGATGAGTTAACCAAGTCGTTGCTTTTGTTGTGTTGTATCTTTCCAAAGGACCATGAAATTGATTTGGAAGATTTATTTCGATTTGGAAGGGGACTGGGACTAACTAAGACTTCTGAAACAATGGAAAAATCAAGGAGGGAGATTGAAATAGCCGTTAACATCCTAAAGGATTCTTGTTTGTTGTTGAAAGTTAGTAATAAAGAAAGGGTGAAAATGCATGACATGGTTCGTGATGTAGCCTTGTTGATGGCATCTGAAAGGGGTCAAGCAATGTTGGCAAGTACTGCAATGGATCTAAGAATGTTGGTAGAGGATGAAACACTAAAAGATAAGAGAGCAATATCCTTATGGGATTTGAAAAATGGTCAACTTCCTAGTGATAATCAATTGAATTGTCCAACACTAGAAATTCTCTTGCTTCATTCTCCAAAGGCTGGCTTTGAAGTATCTAATTTGTGTCTTGAAAGGTTGAAAGTTCTTAAAATACTGTCATTCTTAACATGTGGCTATACGTGGAAGTTGCCTCAATTTAGTCCATCACAGTACATTTTATCATTGCCACAATCAATTGAGTCATTAAAAAATCTTCATACTCTGTGCTTGAGAGGCTATAAGCTAGGTGACATCTCAATTTTGGAAAGTCTACAAGCACTCGAGATTCTTGACTTGCGTGGTTCTTATCTTGAAGAATTGCCTAATGGAATTGTAGAGTTGAAGAAATTGAAGCTTTTGGATTTGTACAATTGTTGGATTGAGAAAAATAATGCTTACGAGGTTGTAGGACGTTTGCAACTAGAGGAATTGTATTTTCATTTATTCTCGTATAAAGAAGACATTCCACATAATGTTTCTTTCTCAAGATTGCAGAGGTATGTTATTGTACTAGATCATAGACCATATTCCTTCCACCTAAAGACAGAAATTATGGAAGAGCATAGACCATCTAGAGCTTTGTACATAAATGGTTTGAATGCATCTACTCAAAGGTTTATATCATTACCAATCATGGATCTATTTTTAAGAGCAGAGTACCTTCATTTGAAGCATCTGAAGGGAGGTTACAAAAATCTTATCCCATCCATGGATCAACAAGGCATGAATCAGTTGATTGCCTTAGTCCTCGAATATTCTTTAGATATAGAATACCTCTTTGATAGTACAATGATTACCACCAAAGATGTTTTTTTGTCCAAACTTGTTACTTTAAGGCTAAATGGCATGCATGGCCTTCAAGAAGTGTTTCATGACCAGTTTTCTCTATGCTCTCTGGAAAATTTACAAGAACTAATCATAGAAAATTGTGCACAATTGTACAGCATATCCTTTCCAAGGTACTCAAATCTATGCAGTATCAAGGTCTTAAGAATATACAATTGCCCAGTCCTAACTTCTCTCTTCATGCCATCCATTGTCAAAACTCTAGTGCTGCTGGAGGTTCTAAAAATATCTGAGTGCCATAAATTGAAGTACATAATAGAAGAAGTCAAAGAAGGGACTATTAACAGACAAAATCATGCATCTATGACGCTCCCAAAATTAAGTATCATTGATATTGAAGGATGTGAAAGGTTGAAATATATATTGCCTGTGTGTTTTCTGGGAGAGCTAGTTAGTTTGCAAAGGATGAGCATTCGAAAATGTAGCGAGTTGATGTATGTATTTGGAAATGAAAAGGAGCATGATCTTTCAGCGTACCAACACCAGAGTACATACCATTGCTTGTATCCAAATTTGCTTAATTTGGATACTTTCAAGTTGGATTCCTTACCAAATCTTGTTGACTTTTGGCCTGATTACTATCGTCCGCGTTTACTAAATTTGAAAGAGGGTCGATGCACTGAGTGTCCCGGACTGTCCAATTCAGCGCGTAAGGTGGTGATTTATTTAAACTTGCGCCAAGACATAACTGCAACGGATAAGGTGGGTAAAGTCTCCTCTCATAGGACACAACAGGATACCACTATAGGCAAGACCATCAGACGTCTTAAGGGAATTTTAGATCGTGCTGAGATGACTTCATCGACTCAAGAATCAATTGCTCCTTCTTCATCCAACAATGCCTATGAGGATATAGCTAGAGCTCAACAACAAGTTGCAGAAGCTCAAAGGGATGCATCAATTGCTCGACAAGAAACTACTGTTGTAAGTCATCTGCTTGAGCAAATGATGGAAAAGTTGGCAGTAAATGAGCAGATAGGATTACAAAAGAGGGCCCATGAGCACGTGGGACTACAGAGGGGAACCCAGCAAGAGCCAGGTGCTGAGAGTAAGGTTTAA 3447 0.369 MEDSVLSIRAKIVEYIVGPILHHAKYLCCFNNFAVNLPNAKRELELTLEQVKLRVREATIRIEKIEPTVEEWLEEVEKVLAEVQILEGRVLKVTKSSFIRQCRYFLAKEMVRKIGQMNQLKCNKLEPFSRSINLPDMKYYSSKDFVLSNSTESTYNKLLETLKDKNVSIIGLVGIEGSGRTTLANEVGKKAEKLKLFEKVVMTTVSQNLNIISIQEQIADKLGFKLEEESEESRAKTLSQSLREGTTLLILDDVWEKLNFEDVGIPLNENNKSCVILLTTQSREICTSMQCQSIIELNRLTNEESWILFKLYANITDDSADALKSVAKNIVDECEGFLISIVTLGSTLKKKSLGDWKSALKRLQDSKPLVITKGLKIPHVCLQLSYDNLTDELTKSLLLLCCIFPKDHEIDLEDLFRFGRGLGLTKTSETMEKSRREIEIAVNILKDSCLLLKVSNKERVKMHDMVRDVALLMASERGQAMLASTAMDLRMLVEDETLKDKRAISLWDLKNGQLPSDNQLNCPTLEILLLHSPKAGFEVSNLCLERLKVLKILSFLTCGYTWKLPQFSPSQYILSLPQSIESLKNLHTLCLRGYKLGDISILESLQALEILDLRGSYLEELPNGIVELKKLKLLDLYNCWIEKNNAYEVVGRLQLEELYFHLFSYKEDIPHNVSFSRLQRYVIVLDHRPYSFHLKTEIMEEHRPSRALYINGLNASTQRFISLPIMDLFLRAEYLHLKHLKGGYKNLIPSMDQQGMNQLIALVLEYSLDIEYLFDSTMITTKDVFLSKLVTLRLNGMHGLQEVFHDQFSLCSLENLQELIIENCAQLYSISFPRYSNLCSIKVLRIYNCPVLTSLFMPSIVKTLVLLEVLKISECHKLKYIIEEVKEGTINRQNHASMTLPKLSIIDIEGCERLKYILPVCFLGELVSLQRMSIRKCSELMYVFGNEKEHDLSAYQHQSTYHCLYPNLLNLDTFKLDSLPNLVDFWPDYYRPRLLNLKEGRCTECPGLSNSARKVVIYLNLRQDITATDKVGKVSSHRTQQDTTIGKTIRRLKGILDRAEMTSSTQESIAPSSSNNAYEDIARAQQQVAEAQRDASIARQETTVVSHLLEQMMEKLAVNEQIGLQKRAHEHVGLQRGTQQEPGAESKV 1148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01233 1148 Coils Coil 69 89 - -
Gma12g01233 1148 Coils Coil 1074 1101 - -
Gma12g01233 1148 SUPERFAMILY L domain-like 461 943 - -
Gma12g01233 1148 Pfam NB-ARC domain 152 388 IPR002182 GO:0043531
Gma12g01233 1148 Coils Coil 41 61 - -
Gma12g01233 1148 Gene3D - 386 471 IPR036388 -
Gma12g01233 1148 PRINTS Disease resistance protein signature 241 255 - -
Gma12g01233 1148 PRINTS Disease resistance protein signature 898 914 - -
Gma12g01233 1148 PRINTS Disease resistance protein signature 169 184 - -
Gma12g01233 1148 PRINTS Disease resistance protein signature 334 348 - -
Gma12g01233 1148 PANTHER DISEASE RESISTANCE PROTEIN-RELATED 9 1005 - -
Gma12g01233 1148 Gene3D - 133 296 IPR027417 -
Gma12g01233 1148 Gene3D - 299 385 IPR042197 -
Gma12g01233 1148 Gene3D Ribonuclease Inhibitor 494 686 IPR032675 -
Gma12g01233 1148 PANTHER DISEASE RESISTANCE PROTEIN RP 9 1005 IPR044974 GO:0006952
Gma12g01233 1148 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 401 IPR027417 -
Gma12g01233 1148 Gene3D Ribonuclease Inhibitor 706 897 IPR032675 -
Gma12g01233 1148 CDD AAA 152 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01233 Gma-Chr12 16324805 16328887 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01233 155 639 WRKY Transcription Factor Family AT5G45050 21.492 3.16e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01233 - - gmx:102669181 2214.5