Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01232 ATGGTCACCAAAAACCAGAACCGGCCTCCATTATCACTCACATCCACACCACCACCTCCTTCAAATTCAAAGAATTTTGAGGGTGATGTGCTCCTCCTAGACAATAAAGAGCAAAGAGTTGGAGCAGAAAAAATGGTGGGGACTCCAATTAATGGAAGAACAAGGCAAGCTTTCACAGTTGTCAATGGCGGTGTCCACGATCTTGGCCCCAGTAGTGCCCCTCCAAGCAATGCTGGATCGGACTATGGTGTCATAGAGTTCACAAGAGAGGATGTGGAAGCATTGCTAAGTGAGAAAGCCAAGAGAAAGGACAGATTTAATTATAAGGAACGATGTGAAAATATGATGGATTATATAAAAAGGCTTAAGGTTTGCATCAGATGGTTCCAAGACCTTGAGATGTACTACTCTCTAGAGCAGGAAAAGTTAAAGAATTCACTGGAACTGACCCAGCAAAAATGCATAGAAATTGAGTTGCTGCTTAAAATCAAGGAAGAAGAATTAAATTCAATTATCTCGGAAATGAGAAGGAATTGCACTTCCTTACAAGAAAAATTGATAAAGGAAGAAACAGAAAAGTCGGCTGCAGCGGAATCTCTTGTTAAAGAGAGAGAAGCTAGGCTTGACATTGAGAGGTCACATAGTACTCTGTCAGAGGACCTTGGAAGAGCCCAACGAGAGATGCAAAGTGCAAATCAGAAGATAGCATCACTCAATGAAATGTATAAGCGGTTACAGGATTACATTACAAGCTTACAACAGTACAATGGAAAACTTCATTCTGAGCTTTCGTCGGTTGAGGATGAACTTAAACGCGTAGAAAAAGAGAAGGCTACTATAGTGGAGAACATCACCATGTTAAGGGGTCAACTTACTATATCCGTTtcttctcaagaggaggctataaaacagaaggatgtcttggctacagaagtttcctctcttagaggagagttgcaacaagtaagagatgagcgagaccggcaattatctcaagtacaaactttaagttctgaattagagaaagttaaagaatctaagaaacactcctccactgaattggacagcttgaccttaaaagctaatgatctggaggaaaaatgttctttgaaagataatcagataaaggcattggaagagcaactagcaactgcagagaagaaattgcaggtgtctaatatatctgcatacgagacaaggacagagtacgaaggacaacaaaaatttgttaatgagttacaaagacgcttagcagatgcagaatataaacttatagaaggggagaggctgaggaaaaaattacataataccattttggagttaaaagggaacattcgtgtattctgtcgagtgaggcctttattagctgatgaaagttgtagcacagaaggcaagattttcagttatccaacatcaatggaaacttctggacgagccattgacctagcccaaaatggccaaaaacattcttttacatttgataaagtttttacaccagaggcatcacaagaagaagtttttgtagaaatttcacagcttgtacaaagtgctcttgatggttacaaggtttgcatctttgcctatggtcagacagggtcagggaaaacctatacaatgatgggaaggcctggacatccagaggagaagggcttgatacctcgttcattagagcaaatatttcaaacaaagcagtctcagcaacctcaaggctggaaatatgaaatgcaggtgtcaatgttggaaatatacaatgaaacgatccgtgatctgatatctacaacaacacgcatggaaaatggtactcctggaaaacaatatacaatcaaacatgacgcaaatggaaatacacaagtttctgatctcacagtagtggatgttcatagtgctaaagaggttgcatttcttttaaatcaagctgcaaatagcagATCTGTGGGTAAAACCCAGATGAATGAACAATCATCAAGAAGTCATTTTGTATTCACTCTTCGAATATACGGTGTAAATGAGAGCACTGACCAACAAGTACAAGGTGTTCTGAACCTCATTGATCTAGCTGGTAGCGAGCGGCTTTCAAAGAGTGGATCAACCGGGGACCGGTTGAAAGAAACTCAAGCAATCAACAAAAGTTTATCATCACTGAGTGATGTTATATTCGCCTTAGCCAAGAAGGAGGATCATGTGCCATTCAGGAACTCAAAGCTTACATATCTCCTTCAGCCTTGTCTAGGTGGAGACTCTAAGACACTAATGTTTGTGAACATTTCACCTGATCCTTCTTCAATTGGCGAGTCACTATGCTCACTCAGGTTTGCATCAAGAGTCAATGCTTGTGAGATTGGAACACCTCGGCGTCAAACTAATGGACGTTCAATAGAGTCTCGCTTGAGCTATTTCTAA 2400 0.235 MVTKNQNRPPLSLTSTPPPPSNSKNFEGDVLLLDNKEQRVGAEKMVGTPINGRTRQAFTVVNGGVHDLGPSSAPPSNAGSDYGVIEFTREDVEALLSEKAKRKDRFNYKERCENMMDYIKRLKVCIRWFQDLEMYYSLEQEKLKNSLELTQQKCIEIELLLKIKEEELNSIISEMRRNCTSLQEKLIKEETEKSAAAESLVKEREARLDIERSHSTLSEDLGRAQREMQSANQKIASLNEMYKRLQDYITSLQQYNGKLHSELSSVEDELKRVEKEKATIVENITMLRGQLTISVSSQEEAIKQKDVLATEVSSLRGELQQVRDERDRQLSQVQTLSSELEKVKESKKHSSTELDSLTLKANDLEEKCSLKDNQIKALEEQLATAEKKLQVSNISAYETRTEYEGQQKFVNELQRRLADAEYKLIEGERLRKKLHNTILELKGNIRVFCRVRPLLADESCSTEGKIFSYPTSMETSGRAIDLAQNGQKHSFTFDKVFTPEASQEEVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPEEKGLIPRSLEQIFQTKQSQQPQGWKYEMQVSMLEIYNETIRDLISTTTRMENGTPGKQYTIKHDANGNTQVSDLTVVDVHSAKEVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSIGESLCSLRFASRVNACEIGTPRRQTNGRSIESRLSYF 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01232 799 Coils Coil 165 192 - -
Gma12g01232 799 PRINTS Kinesin heavy chain signature 520 541 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma12g01232 799 PRINTS Kinesin heavy chain signature 648 665 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma12g01232 799 PRINTS Kinesin heavy chain signature 679 697 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma12g01232 799 PRINTS Kinesin heavy chain signature 728 749 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma12g01232 799 ProSiteProfiles Kinesin motor domain profile. 444 778 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma12g01232 799 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 402 776 IPR027417 -
Gma12g01232 799 Pfam Kinesin motor domain 450 776 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma12g01232 799 Coils Coil 410 430 - -
Gma12g01232 799 CDD KISc_C_terminal 442 780 - -
Gma12g01232 799 MobiDBLite consensus disorder prediction 1 24 - -
Gma12g01232 799 Coils Coil 214 248 - -
Gma12g01232 799 Coils Coil 305 395 - -
Gma12g01232 799 ProSitePatterns Kinesin motor domain signature. 678 689 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gma12g01232 799 Gene3D Kinesin motor domain 388 780 IPR036961 -
Gma12g01232 799 PANTHER KINESIN-LIKE PROTEIN KLP-3 41 798 - -
Gma12g01232 799 SMART kinesin_4 442 786 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gma12g01232 799 Coils Coil 256 283 - -
Gma12g01232 799 PANTHER KINESIN-LIKE PROTEIN 41 798 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01232 Gma-Chr12 16240503 16246248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01232 113 792 Calmodulin-binding Proteins AT5G65930 31.633 9.13e-79 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01232 K10405 - gmx:100784221 1494.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01232 12 16240503 16246248 Gma12g01232 12 16240503 16246248 ECH
Gma12g01232 12 16240503 16246248 Gma06g02456 06 46907595 46913553 GST
Gma13g02530 13 40191183 40197386 Gma12g01232 12 16240503 16246248 PCT
Gma12g02027 12 40907754 40913546 Gma12g01232 12 16240503 16246248 PCT
Gma12g01232 12 16240503 16246248 Gma13g02530 13 40191183 40197386 PCT
Gma12g01232 12 16240503 16246248 Gma12g02027 12 40907754 40913546 PCT