Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01223 ATGGTTTCTAAGGCCATCATCCAATGCAGCTCTTCTTCATCTCACGTGATGAGGACATATGATGTGTTTGTCAGCTTCCGCGGTGAAGACACGCGTAACAACATCACTTCGTTTCTCCTTGGAAGTCTCGAAAGCAAAGGCATCAATGTCTTCAAAGATAATGAAGATCTCAGGAAAGGCGAATCCATAGCACCCGAGCTGCTACAAGCCATTGAAGTGTCTCGCATTTTCGTTGTGGTCTTCTCAAAGAACTATGCTTCTTCAACTTGGTGCTTGCGTGAACTAACACATATCTGCAATTGCACTCAAACATCGCCAGGAAGTGTTCTGCCTATTTTTTATGATGTTGATCCATCAGACGTGCGAAAACTGAGTGGATCTTATGAGGAAGCCTTTGCCAAATATAAAGAAAGATTCAGAGAAGACAGAGAGAAGATGAAGGAAGTGCAGACATGGAGAGAAGCCCTGAAAGAAGTGGGCGAACTCGGTGGTTGGGATATCCGAGATAAGTCACAAAATGCAGAGATTGAAAAAATTGTTCAAACCATAATAAAAAAATTGGGTTCCAAATTTTCAAGTCTTCCGAAAGATAATCTAGTTGGGATGGAATCTCGTGTTGAAGAATTAGTAAAGTGTTTGCGTTTGGGGTCTGTTAATGATGTTCGAGTTGTTGGAATTAGTGGCATGAGTGGAATAGGAAAGACTGAGCTTGCTCGTGCTTTGTATGAAAGAATCTCTGATCAATTTGATGTTCATTGTCTTGTTGATGATGTAAGCAAAATTTATCAAGATTCTGGTAGATTAGGTGTACAAAAACAGTTACTTTCTCAGTGTCTAAATGAAAAAAATCTAGAGATTTATGATGTTTCCCAAGGAACATGTTTGGCATGGAAGAGGCTACAAAATGCAAAGGCACTTGTAGTTTTTGATGAAGTTGTTAATGAAAGACAACTACAGATGTTTACAGGGAACAGAGACTCTCTATTACGCGAATGCCTAGGTGGAGGGAGCAGAATCATCATAATATCTAGGGATGAACATATATTGAGGACACATGGGGTAGATGATGTTTACCAAGTCCCATTGTTGGATAGAGAAGAAGCTGTTCAGTTGTTTTGCAAAAATGCTTTCAAAGATAATTTTATTATGAGTGGTTATGCAGAGTTTGCAGATGTTATACTGTCACAAGCTCAAGGCAATCCCTTAGCAATTAAGGCGGTGGGCTCATCTTTGTTTGGCTTAAATGCCCCGCAGTGGAGAAGTGCAGTGGCTAAGCTAAGAGAACAAAAAAGTAGAGATATTATGGATGTGCTGCGAATTAGTTTTGATGAGTTGGATGACACAAACAAGGAAATATTTCTAGATATTGCTTGCTTCTTCAATAATTTTTATGTGAAATCTGTAATGGAAATTCTAGATTTTCGTGGATTTTACCCCGAACATGGCCTACAAGTTCTCCAAGACAGATCACTCATAATCAATGAATATGGGATCATTGGAATGCATGGCTTGTTGATAGATTTGGGCAGGTGCATTGTTCGAGAAAAATCACCTAAAGAGCCAAGCAATTGGAGCAGATTGTGGAAGTACCAAGATCTCTATAAAATCATGTCAAATAATATGGCAGCAGAGAAACTTGAAGCCATCGCTGTTGATTATGAATCAGATGATGAGGGGTTTCATGAAATAAGGGTCGATGCTTTATCGAAAATGAGTCACCTTAAGTTGCTCAAACTTTGGGGTGTGACTTCTTCTGGAAGCCTCAATCATCTTTCTGATGAATTAGGATATATTACTTGGGATAAATATCCTTTCGTATGTTTGCCTAAAAGTTTTCAGCCAAACAAACTAGTTGAGTTGTGCCTGGAATACAGCAACATCAAACATCTATGGAAAGATAGAAAGCCTCTACACAATTTGAGACGTTTGGTTCTCTCTCATTCCAAAAATCTAATCGAGTTGCCAGATTTAGGGGAGGCTCTAAATCTTGAGTGGCTAGATCTGAAAGGATGCATAAAACTCAAGAAGATTAATCCATCCATCGGTCTTCTAAGAAAGCTGGCTTATTTGAATTTGAAAGACTGCACAAGTCTTGTTGAGTTACCACATTTCAAAGAGGACCTAAATCTTCAACATCTAACTCTTGAAGGATGTACACATCTCAAGCATATCAATCCATCCGTCGGTCTTCTAAGAAAGCTTGAATATTTGATTTTGGAAGACTGTAAAAGTCTAGTAAGCTTACCCAACAGCATATTGTGCCTCAATTCACTTAAATATTTGAGTCTATATGGCTGTTCAGGACTGTATAATAGCGGGTTATTAAAAGAACCTAGGGATGCAGAGCTTTTGAAGCAGCTGTGTATAGGTGAAGCTTCTACTGATTCCAAATCAATATCCTCCATAGTGAAAAGGTGGTTTATGTGGTCTCCACGTTTGTGGTATTCCAGAGCACATAACGACTCAGTTGGTTGTCTGTTGCCTTCCGCGCCAACTATCCCACCATCTATGATTCAACTTGATCTAAGTTACTGCAATTTAGTTCAAATCCCCGATGCTATTGGAAATTTACATTGCTTAGAAATCCTAAATTTAGAAGGAAACAGTTTTGCAGCACTGCCTGACCTCAAGGGGCTTTCCAAACTGCGTTATTTAAAATTAGACCATTGCAAGCACTTGAAAGATTTTCCTAAGCTCCCTGCACGAACTGATTTTTCATACACTTTCCTCTTACCAATACTGGGAAGAGCAGTAGAACTTCCAGTTTGGGGATTTAGTGTGCCTAAAGCACCAAATGTAGAACTTCCAAGAGCATTGGGATTAAGTATGTTCAATTGCCCAGAATTAGTTGAGAGGGAAGGCTGCAGTAGCATGGTTTTATCATGGATGATACAAATTGTTCAGGCGCACTACCAAAGCAATTTTGCGTGGTGGCCTATAGGAATGCCTGGATTTTCCAATCCATACATTTGTAGTGTTATTCCAGGAAGTGAAATAGAAGGGTGGTTCACCACTCAGCATGTGAGCAAGGACAACTTAATAACCATAGACCCACCTCCCCTTATGCAGCATGACAAATGCATTGGCGTTGCTTATTGTGTAGTATTCGCAGCTCATTCAACAGATTTGGAGATGGTTCCTCCAGAAACAGAACGAGGTTATCCTGTTATGGGCATCGTTTGGATTCCGGTGGATGTTCATGAAGATGTAGTCACAGACAAATCAGATCACCTGTGCTTATTCTATTCGCCTACGTATATAGGAATTGGAGACTGGAAATTAAAAGTGAAAATAATGGACAGGAAAGGTTTTCCTGTGGAGGTGAAGAAATACGGGTATCGTAGGGTACATGAAGAGGATCTAGATCTAGAACCATCACTCAACACAGCAGGAATCCGGAAGAGGAAAAGGGGAACTGATGAATAA 3426 0.3981 MVSKAIIQCSSSSSHVMRTYDVFVSFRGEDTRNNITSFLLGSLESKGINVFKDNEDLRKGESIAPELLQAIEVSRIFVVVFSKNYASSTWCLRELTHICNCTQTSPGSVLPIFYDVDPSDVRKLSGSYEEAFAKYKERFREDREKMKEVQTWREALKEVGELGGWDIRDKSQNAEIEKIVQTIIKKLGSKFSSLPKDNLVGMESRVEELVKCLRLGSVNDVRVVGISGMSGIGKTELARALYERISDQFDVHCLVDDVSKIYQDSGRLGVQKQLLSQCLNEKNLEIYDVSQGTCLAWKRLQNAKALVVFDEVVNERQLQMFTGNRDSLLRECLGGGSRIIIISRDEHILRTHGVDDVYQVPLLDREEAVQLFCKNAFKDNFIMSGYAEFADVILSQAQGNPLAIKAVGSSLFGLNAPQWRSAVAKLREQKSRDIMDVLRISFDELDDTNKEIFLDIACFFNNFYVKSVMEILDFRGFYPEHGLQVLQDRSLIINEYGIIGMHGLLIDLGRCIVREKSPKEPSNWSRLWKYQDLYKIMSNNMAAEKLEAIAVDYESDDEGFHEIRVDALSKMSHLKLLKLWGVTSSGSLNHLSDELGYITWDKYPFVCLPKSFQPNKLVELCLEYSNIKHLWKDRKPLHNLRRLVLSHSKNLIELPDLGEALNLEWLDLKGCIKLKKINPSIGLLRKLAYLNLKDCTSLVELPHFKEDLNLQHLTLEGCTHLKHINPSVGLLRKLEYLILEDCKSLVSLPNSILCLNSLKYLSLYGCSGLYNSGLLKEPRDAELLKQLCIGEASTDSKSISSIVKRWFMWSPRLWYSRAHNDSVGCLLPSAPTIPPSMIQLDLSYCNLVQIPDAIGNLHCLEILNLEGNSFAALPDLKGLSKLRYLKLDHCKHLKDFPKLPARTDFSYTFLLPILGRAVELPVWGFSVPKAPNVELPRALGLSMFNCPELVEREGCSSMVLSWMIQIVQAHYQSNFAWWPIGMPGFSNPYICSVIPGSEIEGWFTTQHVSKDNLITIDPPPLMQHDKCIGVAYCVVFAAHSTDLEMVPPETERGYPVMGIVWIPVDVHEDVVTDKSDHLCLFYSPTYIGIGDWKLKVKIMDRKGFPVEVKKYGYRRVHEEDLDLEPSLNTAGIRKRKRGTDE 1141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01223 1141 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 697 IPR044974 GO:0006952
Gma12g01223 1141 SUPERFAMILY L domain-like 562 898 - -
Gma12g01223 1141 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 17 697 - -
Gma12g01223 1141 Pfam NB-ARC domain 204 432 IPR002182 GO:0043531
Gma12g01223 1141 Gene3D - 15 188 IPR035897 -
Gma12g01223 1141 ProSiteProfiles TIR domain profile. 18 187 IPR000157 GO:0007165
Gma12g01223 1141 Pfam TIR domain 20 201 IPR000157 GO:0007165
Gma12g01223 1141 Gene3D Ribonuclease Inhibitor 819 951 IPR032675 -
Gma12g01223 1141 Gene3D Ribonuclease Inhibitor 708 791 IPR032675 -
Gma12g01223 1141 Gene3D Ribonuclease Inhibitor 555 707 IPR032675 -
Gma12g01223 1141 Gene3D - 362 446 IPR042197 -
Gma12g01223 1141 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 165 IPR035897 -
Gma12g01223 1141 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 697 909 - -
Gma12g01223 1141 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 456 IPR027417 -
Gma12g01223 1141 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 697 909 IPR044974 GO:0006952
Gma12g01223 1141 SMART till_3 19 162 IPR000157 GO:0007165
Gma12g01223 1141 SUPERFAMILY "Winged helix" DNA-binding domain 433 536 IPR036390 -
Gma12g01223 1141 PRINTS Disease resistance protein signature 397 411 - -
Gma12g01223 1141 PRINTS Disease resistance protein signature 223 238 - -
Gma12g01223 1141 PRINTS Disease resistance protein signature 877 893 - -
Gma12g01223 1141 PRINTS Disease resistance protein signature 299 313 - -
Gma12g01223 1141 Gene3D - 189 357 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01223 Gma-Chr12 16019617 16023836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01223 18 769 WRKY Transcription Factor Family AT4G12020 30.692 6.31e-84 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01223 - - gmx:100790778 2288.46