Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01219 ATGGTGAGCGAGATATGTGAGAACTCAAGATCTACAATGAGATCTAACTTCCTTCTCATTGGTATCACCATCATTCCCCCCATCCTCCCTTGTGTTGAAACCTCCCGCTTTGAGGAACAATATTTGTTGGAAACAAAAGGGAGGGCATTCTTGGATTTGAAAAAAGAGAAGAATATGTTAGTTAATAGTGTAGACGAGGGGAGACCAAATTTCGGATCAGGTCTGAGCAATCTGGTTGGTAGAACCTTTGGTCTTAGAGAGTCAAGTTTTATGTCTGAATTAGACGATCAAATTCCTACTGCCTTCGATCCTTTTGCTGATGCAAATGCTGATGACTCGGGTGCTGGGTCAAAGGAGTATGTGCATATTCGCGTACAGCAGCGAAATGGAAGGAAAAGCCTGACAACCGTTCAGGGATTGAAAAAAGAATTCAGCTATAACAAGATACTTAAAGATGTTAAGAAAGAGTTCTGTTGCAATGGAACAGTTGTTCAGGACCCAGAACTAGGACAGGTTATTCAACTTCAAGGTGATCAGAGGAAGAATGTTTCTACCTTCCTGGTCCAGGCTGGTATCGTGAAGAAGGAGCATATCAAGATTCATGGTTTCTGA 612 0.4199 MVSEICENSRSTMRSNFLLIGITIIPPILPCVETSRFEEQYLLETKGRAFLDLKKEKNMLVNSVDEGRPNFGSGLSNLVGRTFGLRESSFMSELDDQIPTAFDPFADANADDSGAGSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDVKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKIHGF 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01219 203 Gene3D - 83 203 - -
Gma12g01219 203 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 97 203 IPR005874 GO:0003743
Gma12g01219 203 CDD eIF1_SUI1 119 202 IPR005874 GO:0003743
Gma12g01219 203 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 91 203 - -
Gma12g01219 203 SUPERFAMILY eIF1-like 92 203 IPR036877 GO:0003743|GO:0006413
Gma12g01219 203 PANTHER PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG ISOFORM X1 91 203 - -
Gma12g01219 203 Pfam Translation initiation factor SUI1 118 192 IPR001950 GO:0003743|GO:0006413
Gma12g01219 203 ProSiteProfiles Translation initiation factor SUI1 family profile. 121 191 IPR001950 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01219 Gma-Chr12 15920923 15926303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01219 91 203 Eukaryotic Initiation Factors Gene Family AT4G27130 90.265 3.95e-74 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01219 K03113 - gmx:100306129 213.386
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01219 12 15920923 15926303 Gma12g01219 12 15920923 15926303 ECH