Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01216 ATGGCCACCTTCATCTTAAGGTCTAACAAAGCAGTGCATGCCTTTGGTTGGCTTTGTCTGCTACTGATGGTTCATAAGGGTGCTTCCTATGATTTTGTTGTTGGTGGCCAAAAGGGTTGGAGTGTTCCAAATGACCCCAGTTTCAATCCCTTCAATCAATGGGCAGAAAAAAGCCGTTTTCAAATTGGAGACTCCCTTGTGTTCAACTACCAATCTGGCCAAGACTCAGTGCTCTATGTAAAGAGTGAAGACTATGCCAGCTGCAACATTGATTCACCTTATGCAAAATACTCTGATGGCCACACAGTCTACAAGCTAAACCAATCAGGCCCTCACTTCTTCATAAGTGGCAACAAAGACAACTGCAACAAGAATGAGAAGTTGACAGTGATTGTGCTAGCTGACAGGAACAAAAACACCAACCAAACAACCACTGCTTCTCCACCATCACCACAAACATCATCATCTCCTTCAGCAGCACCTACTGGCCAAGATCAGGGTCAGTCTCCAACTTCAGACACAAACCAAACACCAAGCCCTGTCAGTGAGCCACCCCCTCCCAATGCTGCTGCTTCAGCCTTTGTCTCCCTTGCTGGCTCTGTTGGAGCATTCATGGCCTCAGTGCTAGTTTTATCTCTCTAA 642 0.4626 MATFILRSNKAVHAFGWLCLLLMVHKGASYDFVVGGQKGWSVPNDPSFNPFNQWAEKSRFQIGDSLVFNYQSGQDSVLYVKSEDYASCNIDSPYAKYSDGHTVYKLNQSGPHFFISGNKDNCNKNEKLTVIVLADRNKNTNQTTTASPPSPQTSSSPSAAPTGQDQGQSPTSDTNQTPSPVSEPPPPNAAASAFVSLAGSVGAFMASVLVLSL 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01216 213 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Gma12g01216 213 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 5 213 - -
Gma12g01216 213 MobiDBLite consensus disorder prediction 140 178 - -
Gma12g01216 213 Pfam Plastocyanin-like domain 40 124 IPR003245 GO:0009055
Gma12g01216 213 CDD OsENODL1_like 30 133 IPR041846 -
Gma12g01216 213 MobiDBLite consensus disorder prediction 140 191 - -
Gma12g01216 213 SUPERFAMILY Cupredoxins 29 133 IPR008972 -
Gma12g01216 213 Gene3D - 30 146 IPR008972 -
Gma12g01216 213 PANTHER BLUE COPPER PROTEIN 5 213 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01216 Gma-Chr12 15848859 15850782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01216 14 194 Phytocyanin Superfamily AT3G20570 50.273 1.30e-54 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01216 - - gmx:100781182 382.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01216 12 15848859 15850782 Gma12g01216 12 15848859 15850782 ECH
Gma12g01216 12 15848859 15850782 Gma13g02550 13 40392451 40394001 PCT
Gma12g01216 12 15848859 15850782 Gma12g02009 12 40690436 40692154 PCT