Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01207 ATGGCTACTACCATAACAGAGCAAGACACCTCATCACGTGCCCCACACGTGCTCGATTACGCCACCACTACATCTGACGAGGAGACGGAACAGGACGAGGAGGAGGAGCTGGTGCCGGAGGAAAACGGCTTCGGGAACGGCGTACGGTGGTTTCCGGCGGCGAGCGGTTGCGGAGGGCGACGGAGCGGGGGAGGTGCGTTGGGTAGGGTTCTTGACCCGAGGGCGAAGTGGGTCCAGGAATGGAACAGGGTTTTCCTGCTAGTGTGCGCCGCGGGGCTGTTCGTGGACCCTCTCTTCTTCTACGTGCTATCCGTCAGCGACTCGTGCATGTGCGTCTTCGTGGATGGGTGGCTCGCTGTCACCGTCACGGTGCTGCGCTGCATGACGGATGCGCTTCACGTGTGGAACATGGTTATAAGGAGCAAGATGGCGAAACGCACCTTCGGATTGGGCGCCGCCACCGCTTCCGGCAGAGGATCTTCATCCTCCATCGGACTCAGAGACACCCGACCGTGCTCCGTCGCCATCGGTTATCTCAAGTCACGGACCGGATTCTTTTTTGACCTGTTTGTTATTCTTCCTCTACCACAGATTGTGCTTTGGGTGGCAATCCCCTCCTTGTTGGAGAAAGGTTCTGTTACATTGGTGATGACAGTGTTCTTAATTATTTTTCTATTCCAATACCTTCCCAAAATTTATCATTCGGTTTGCCATCTGCGACGCACGCAAAACCTCTCTGGCTACATTTTTGGAACAGTTTGGTGGGGAATCGCCCTTAACATGATCGCATATTTTGTTGCTTCTCATGCAGCAGGGGCGTGCTGGTACTTGCTGGGGATACAAAGGGCAGCCAAGTGTCTCAAAGTGCAGTGTGCGAAAACAAGTGGTTGTGGCATGAAAATCCTGTCTTGTCAAACGCCTATATATTACGGAAGCAACAGTTTGCTAGTTAGGGATAAGGCAAGGTTGGCTTGGGCAGAGAACAGGGAAGTGAGACACACATGCCTAAATGGTCCTGACAGCTACAACTATGGAGCTTATAGATGGACTGTTCAGCTTGTCACAAACGATAATCGATTGGAAAAGATACTTTTCCCTATCTTCTGGGGCCTAATGACTCTCAGCACTTTTGGAAACCTAGAGAGTACAACTGAATGGCTAGAAGTAGTTTTCAACATCATTGTGCTGACCAGTGGCCTTCTTCTTGTCACTATGTTGATTGGAAACATCAAGGTATTTTTGCACGCAACAACGTCAAAGAAGCAAGCAATGCAATTGAAGATGAGGAATATTGAATGGTGGATGAGAAAACGACGCTTGCCGCTAGGGTTTAGGCAGCGCGTGCGTAACTATGAGAGGCAGCGTTGGGCTGCCATGCGTGGGGTTGATGAATTCGAGATGACTAAAAATCTCCCTGAGGGATTAAGAAGAGACATCAAGTACCATCTTTGTCTAGACTTGGTGAGACAGGTGCCTCTATTTCAACACATGGACGATCTGGTTCTAGAGAACATCTGTGACCGTGTGAAGTCTCTGATATTCACAAAGGGAGAAACAATAGCTAGAGAAGGAGACCCAGTTCAGAGAATGCTATTTGTAGTAAGGGGTCATCTTCAAAGCAGCCAAGTCCTAAGGGATGGTGTGAAGAGTTGTTGCATGTTAGGTCCAGGAAACTTCAGTGGGGACGAGCTCCTTTCGTGGTGTTTGAGGAGGCCTTTCATAGAACGCCTTCCGCCGTCTTCATCCACACTCATCACGTTGGAAACCACCGAGGCGTTCGGCCTTGAAGCCCAGGACGTGAAGTATGTGACACAACATTTCAGGTACACATTTGTTAAGGAAAAGGTGAAGAGAAGTGCAAGGTATTACTCACCAGGGTGGAGAACTTGGGCTGCTGTGGCCATTCAATTGGCATGGAGGAGGTACAAGCATAGGTTGACTTTGACTTCATTGTCCTTTATAAGGCCCAGGAGACCTTTGTCACGGTCTTCTTCCATCGGAGAGGACAAGCTTCGCCTCTACACAGCTTTGTTAACCTCCCCAAAGCCTAATCAGGATGATTTTGACTTTTGA 2073 0.4969 MATTITEQDTSSRAPHVLDYATTTSDEETEQDEEEELVPEENGFGNGVRWFPAASGCGGRRSGGGALGRVLDPRAKWVQEWNRVFLLVCAAGLFVDPLFFYVLSVSDSCMCVFVDGWLAVTVTVLRCMTDALHVWNMVIRSKMAKRTFGLGAATASGRGSSSSIGLRDTRPCSVAIGYLKSRTGFFFDLFVILPLPQIVLWVAIPSLLEKGSVTLVMTVFLIIFLFQYLPKIYHSVCHLRRTQNLSGYIFGTVWWGIALNMIAYFVASHAAGACWYLLGIQRAAKCLKVQCAKTSGCGMKILSCQTPIYYGSNSLLVRDKARLAWAENREVRHTCLNGPDSYNYGAYRWTVQLVTNDNRLEKILFPIFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRRLPLGFRQRVRNYERQRWAAMRGVDEFEMTKNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFTKGETIAREGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSSTLITLETTEAFGLEAQDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLTLTSLSFIRPRRPLSRSSSIGEDKLRLYTALLTSPKPNQDDFDF 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01207 690 MobiDBLite consensus disorder prediction 25 39 - -
Gma12g01207 690 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 26 687 - -
Gma12g01207 690 SUPERFAMILY cAMP-binding domain-like 419 607 IPR018490 -
Gma12g01207 690 Pfam Ion transport protein 81 410 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gma12g01207 690 SUPERFAMILY Voltage-gated potassium channels 73 414 - -
Gma12g01207 690 MobiDBLite consensus disorder prediction 1 24 - -
Gma12g01207 690 CDD CAP_ED 493 599 IPR000595 -
Gma12g01207 690 Pfam Cyclic nucleotide-binding domain 514 601 IPR000595 -
Gma12g01207 690 Gene3D Helix hairpin bin 418 484 - -
Gma12g01207 690 ProSiteProfiles cAMP/cGMP binding motif profile. 493 603 IPR000595 -
Gma12g01207 690 Gene3D Jelly Rolls 491 609 IPR014710 -
Gma12g01207 690 MobiDBLite consensus disorder prediction 1 39 - -
Gma12g01207 690 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 26 687 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01207 Gma-Chr12 15617604 15630949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01207 57 689 Ion Channels AT5G54250 78.538 0.0 1025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01207 K05391 - gmx:100783341 1324.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01207 12 15617604 15630949 Gma06g02499 06 47554915 47566505 GST