Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01190 ATGAACTCTGCCGCCGTCGCAATCAAATCCATCAAACTCAACCGCTCCCGGCCTGACTTAGACGATGTCCGTTGCGAGGCCAAAACCCCATCCCTCCTTTCCTACCCCAACATCCTCAAAGCACATTGTTCCTTCACAGTGGATCGCTGCCTCTGGGTGGTGATGTCGTTCATGGCCGCAGGATCACTTCAATCCATCATTTATCATTCCCACCCCAACGGCTTAATGGAGCCCTACATCACCGTGGTTCTCAGAGACACGCTCAACGCGCTCTCCTACCTCCACTGCCAGCATCTCCATAGAGACATTAAAGTCGGTAACATCCTCATTTACACCAATGGGCAAGTGAAGCTTGCTGATTTCGGTGTCTCCGCTTCCATATACGAGTCCACCACCACCACCACCACGTCTTCTTCTTCGTCTCTGAAGTTCACTAATGTTGTCGGCACGCCCTATTGGATGGCTCCTGAGGTGATTCACTCACACACAGGTTACAGTTTCGAGGCTGATATATGGTCTTTTGGGATAACCGCGTTGGAGCTTGCGCATGGAAGGCCTCCTCTCTCGCACCTTCCACCTTCCAAGTTCATGATGCTCAAGATCACCAAGAGGTTTCCTTTCTCCGATGATTTCGATGACAAGGAAAATATGATAACACAATTAAAGAATGCACAGAGGCATTAG 684 0.5 MNSAAVAIKSIKLNRSRPDLDDVRCEAKTPSLLSYPNILKAHCSFTVDRCLWVVMSFMAAGSLQSIIYHSHPNGLMEPYITVVLRDTLNALSYLHCQHLHRDIKVGNILIYTNGQVKLADFGVSASIYESTTTTTTSSSSSLKFTNVVGTPYWMAPEVIHSHTGYSFEADIWSFGITALELAHGRPPLSHLPPSKFMMLKITKRFPFSDDFDDKENMITQLKNAQRH 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01190 227 Gene3D Transferase(Phosphotransferase) domain 1 2 227 - -
Gma12g01190 227 Pfam Protein kinase domain 4 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01190 227 PANTHER SERINE/THREONINE-PROTEIN KINASE BLUS1 1 222 - -
Gma12g01190 227 SMART serkin_6 2 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01190 227 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 222 - -
Gma12g01190 227 SUPERFAMILY Protein kinase-like (PK-like) 4 212 IPR011009 -
Gma12g01190 227 PIRSF ILK 2 222 - -
Gma12g01190 227 ProSiteProfiles Protein kinase domain profile. 1 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01190 Gma-Chr12 15245181 15246145 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01190 1 209 MAP Kinase Kinase Kinase Kinase AT4G14480 70.000 3.38e-101 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Gma12g01190 Pkinase 3.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01190 K08835 - gsj:114379574 442.195