Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01173 ATGTTGGCATACAGGACACGCCTCTGTCATCTGTTTCTTATTAAATTATCGGGTACCAAAATTGGCTCTAAAAGGAAAAAGGTTCTAAATTTTGAGAACCACAGATTTACCAACAAATGGTTTGCAATTGTATTGTCTATAGTAAACAGTAATGCACAAGAGAGATACCTCTTATCACCGTGCCGTAGGCTACCCCGTTGTGGTTGCCAGCTGTGTCGTGAGAGTGAGAAGCAGAGGGTAACGAGGAAGGTGAAGTGGTTCGATGACCAGCAGGGAGTGGGTCGCGTCAACGACGCCAGCACTGGAAAATCCTTTTACGGCCCCGGCGGCCCCTACGCCATGTTCGCCGGCAAAGACACCAGCAGAGCCCTGGCGAAGATGAGCAAGAACGACGACGACATCCCCCCCTCCCTCGACGACCTCTCTGATAAGGCGATAGACGTTCTCAATGACTGGGAGAACAAATTCCAAGCTAAGTACCTGGTGGTTGCTCGTGGAATCAGTTATGCTAACCTTGCCCCCCCTGTGTATGTTGTTCTTGGAAGCTCAATGGATCTTGCAGTAGGACATGTTTCTATTGCTTCCCTAGTGCTGGGATCCATGCTCACAGAGGAAGTGTCTCCCAGTGAACAACCTCATCATTTTCTTCAATTAGGTTTAACTTCAACATTCTTTGCTGGGATCTTTCAAGCCGCTCTTGGAATTCTAAGAACTGAGCTTGATGGAAGTTCTGAGACTGAGATGATGGTTTATCCTCCATTCGAATTCTCAGATGTTTCCCCTCCTTCCATTATTACCGAGGGAACCCATGGAGGTCCGTGGAGAAAAAAAATGTCTGATTTAGATGGAACTGTGGATGAAAAAGACTTCCCCTGGTGGTGTTTGGACTCTGTATTGAATAATCGGTTACCTAGCTTCTAG 921 0.4701 MLAYRTRLCHLFLIKLSGTKIGSKRKKVLNFENHRFTNKWFAIVLSIVNSNAQERYLLSPCRRLPRCGCQLCRESEKQRVTRKVKWFDDQQGVGRVNDASTGKSFYGPGGPYAMFAGKDTSRALAKMSKNDDDIPPSLDDLSDKAIDVLNDWENKFQAKYLVVARGISYANLAPPVYVVLGSSMDLAVGHVSIASLVLGSMLTEEVSPSEQPHHFLQLGLTSTFFAGIFQAALGILRTELDGSSETEMMVYPPFEFSDVSPPSIITEGTHGGPWRKKMSDLDGTVDEKDFPWWCLDSVLNNRLPSF 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01173 306 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 94 163 IPR036400 -
Gma12g01173 306 PANTHER TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED 226 306 - -
Gma12g01173 306 Pfam Sulfate permease family 173 237 IPR011547 GO:0016021
Gma12g01173 306 Gene3D - 92 167 IPR036400 -
Gma12g01173 306 PANTHER WD REPEAT-CONTAINING PROTEIN 48 226 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01173 Gma-Chr12 15008419 15011103 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01173 161 237 Inorganic Solute Cotransporters AT3G15990 54.945 1.83e-20 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01173 K15361 - gmx:100812140 187.963