Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma12g01162 ATGGCCTCCTTGCCCTTGGGGCACCACCACCACCACCACAAACCGGCGGCGGCGGCTATACATCCGTCGCAACCGCCGCAGTCTCAGCCGCAACCCGAAGTTCCTCGCCGGAGCTCCGATGTGGAGACCGATAAGGATATGTCAGCTACTGTCATTGAGGGGAATGATGCTGTCACTGGCCACATAATCTCCACCACAATTGGAGGCAAAAATGGGGAACCTAAAGAGACCATCAGTTACATGGCAGAACGTGTTGTTGGCACTGGATCATTTGGAGTTGTTTTTCAGGCAAAGTGCTTGGAGACTGGAGAAGCAGTGGCTATTAAAAAGGTCTTGCAAGACAGGCGGTACAAAAATCGTGAATTGCAGTTAATGCGCTTAATGGATCACCCTAATGTAATTTCCCTGAAGCACTGTTTCTTCTCCACAACAAGCAGAGATGAACTTTTTCTAAACTTGGTAATGGAATATGTTCCCGAATCAATGTACCGAGTTATAAAGCACTACACTACTATGAACCAGAGAATGCCTCTCATCTATGTGAAACTGTATACATATCAAATCTTTAGGGGATTAGCATATATCCATACCGCACTGGGAGTTTGCCATAGGGATGTGAAGCCTCAAAATCTTTTGGTTCATCCTCTTACTCACCAAGTTAAGCTATGTGATTTTGGGAGTGCCAAAGTTCTGGTCAAGGGTGAATCAAACATTTCATACATATGTTCACGTTACTATCGGGCTCCAGAACTAATATTTGGTGCAACAGAATACACAGCTTCTATTGATATCTGGTCAGCTGGTTGTGTTCTTGCTGAACTTCTTCTAGGACAGCCATTATTTCCTGGAGAAAACCAAGTGGACCAACTTGTGGAAATTATCAAGGTTCTTGGTACTCCAACACGCGAGGAAATCCGTTGTATGAACCCAAATTATACAGAGTTTAGATTCCCTCAGATTAAAGCTCATCCTTGGCACAAGGTTTTCCACAAGCGAATGCCTCCTGAAGCAATTGACCTTGCATCAAGGCTTCTCCAATATTCACCTAGTCTCCGCTGCACTGCGCTGGAAGCATGTGCACATCCTTTCTTTGATGAGCTTCGCGAACCAAATGCCCGGCTACCTAATGGCCGTCCACTGCCCCCACTTTTCAACTTCAAACAGGAGTTAGCTGGAGCATCACCTGAACTGATCAATAGGCTCATCCCAGAGCATATTAGGCGGCAGATGGGTCTCAGCTTCCCGCATTCT 1251 0.4612 MASLPLGHHHHHHKPAAAAIHPSQPPQSQPQPEVPRRSSDVETDKDMSATVIEGNDAVTGHIISTTIGGKNGEPKETISYMAERVVGTGSFGVVFQAKCLETGEAVAIKKVLQDRRYKNRELQLMRLMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPESMYRVIKHYTTMNQRMPLIYVKLYTYQIFRGLAYIHTALGVCHRDVKPQNLLVHPLTHQVKLCDFGSAKVLVKGESNISYICSRYYRAPELIFGATEYTASIDIWSAGCVLAELLLGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPNYTEFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELAGASPELINRLIPEHIRRQMGLSFPHS 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma12g01162 417 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Gma12g01162 417 ProSitePatterns Protein kinases ATP-binding region signature. 86 110 IPR017441 GO:0005524
Gma12g01162 417 PANTHER OS02G0236200 PROTEIN 38 413 - -
Gma12g01162 417 MobiDBLite consensus disorder prediction 1 17 - -
Gma12g01162 417 Gene3D Transferase(Phosphotransferase) domain 1 160 407 - -
Gma12g01162 417 SMART serkin_6 80 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01162 417 ProSiteProfiles Protein kinase domain profile. 80 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01162 417 MobiDBLite consensus disorder prediction 1 43 - -
Gma12g01162 417 Pfam Protein kinase domain 80 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma12g01162 417 Gene3D Phosphorylase Kinase; domain 1 65 159 - -
Gma12g01162 417 SUPERFAMILY Protein kinase-like (PK-like) 79 388 IPR011009 -
Gma12g01162 417 CDD STKc_GSK3 75 367 IPR039192 -
Gma12g01162 417 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 38 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma12g01162 Gma-Chr12 14658962 14663647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma12g01162 84 402 MAP Kinase Gene Family AT3G59790 35.329 3.10e-58 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Gma12g01162 Pkinase 4.2e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma12g01162 K14502 K00924 gmx:100810924 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma12g01162 12 14658962 14663647 Gma12g01162 12 14658962 14663647 ECH